| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1613 |
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| Symbol | |
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| ID | 8534771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1752548 |
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| End bp | 1753081 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384000 |
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| Product | Peptidase S26, conserved region |
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| Protein accession | YP_003263488 |
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| Protein GI | 261856205 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTTC ACAAAAAAAG TTTGCTCGGT GTTTTTGCCG TGATCGGGGT TTTTGCCGCC
GTTATTTTGC TGGCGCGCGG GTTCGGAGTG TTTTACAACG ACACCCCATC CATCCCTGAA
GGGTTCTGGT ATTCAACCAG TAAGCCAAGC CCTGAACTGG GTGATTTTGT GGCGGCTTGT
CCGCCTATCC CTGCTGCGAA ACTTGCGCTT GAGCGCGATT ACTTGCCTGC TGGCCGCTGC
CCGAGCGGCA CGGTGCCGTT ATTAAAACGG GTGTATGCCA CGCCCTTTGA TCTGGTGCGC
ATCAAGGGTG GCACCTTGTT CATCCAACAT GGCGAAACAG CCATCACTCA CTCTATCAAT
GTACTCAAAA CTGATCCCGA AGGCCGACCG CTGATCCAAG CTCTCGGCGG GGTATTGAGT
GCTTCGCAGT ATTGGCTCGG TAGCCCGTGC CCGATTGGTT TTGATAGCCG CTATTTCGGC
GCGGTTCAGC GCCAAAACAT CATCTCGGTC ATTCGACCGT TATTCACCTG GTAG
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| Protein sequence | MRVHKKSLLG VFAVIGVFAA VILLARGFGV FYNDTPSIPE GFWYSTSKPS PELGDFVAAC
PPIPAAKLAL ERDYLPAGRC PSGTVPLLKR VYATPFDLVR IKGGTLFIQH GETAITHSIN
VLKTDPEGRP LIQALGGVLS ASQYWLGSPC PIGFDSRYFG AVQRQNIISV IRPLFTW
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