Gene Hneap_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1417 
Symbol 
ID8534574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand- 
Start bp1529177 
End bp1529797 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID646383809 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_003263298 
Protein GI261856015 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.635445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAGC GTTTGGATGA GCTTGTCTTG TGTGCCGATG GTCGACGACG TTGTGCTTGG 
TGTGCTTCTG CGCCTGAGTT CCCGGATTAT CACGATAATG AATGGGGTTT CCCTGTCGAC 
GACGACATTC GGTTATTCGA AAAGATCTGT CTGGAAGGTT TCCAGTCGGG TTTGAGCTGG 
CGCACGATCC TCGTGAAACG GCCGGCATTT CGAGACGCGT TCGTTGATTT CGATTTTCAT 
CGCCTTGCTG AGTTCACAGA AGTGAATGTT GGCGAGCTAA TGAATAATAA AGGCATTGTG 
CGACACCGGG GCAAGATCGA AGCCGTGATC AATAACGCAA AGCGTGCAAT TGAAATGCTG 
CAAAACCACG GCTCATTGTC TGCTTTTTTC TGGCGTTATG AACCCGATCC GAGCCAATTC 
CATGAACCGC AAATGGTGAC GACTTGCCCT GAAGCCATTG CCTTATCAAA GGATCTTAAG 
AAACTTGGCT GGAAGTTCGT CGGTCCGACG ACCCTGTTCG CTTTCATGCA GGCAATGGGG 
ATGGTCAATG ACCATGTGCA TGGTTGTATC AGCCGATTTG CCGTGGAACA GGCGCGTCAG 
GACTTCAAGC GTCCTGGCTG A
 
Protein sequence
MTERLDELVL CADGRRRCAW CASAPEFPDY HDNEWGFPVD DDIRLFEKIC LEGFQSGLSW 
RTILVKRPAF RDAFVDFDFH RLAEFTEVNV GELMNNKGIV RHRGKIEAVI NNAKRAIEML 
QNHGSLSAFF WRYEPDPSQF HEPQMVTTCP EAIALSKDLK KLGWKFVGPT TLFAFMQAMG 
MVNDHVHGCI SRFAVEQARQ DFKRPG