Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1327 |
Symbol | |
ID | 8534483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1438030 |
End bp | 1439565 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646383719 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003263209 |
Protein GI | 261855926 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.566975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCAAC CTGAACCAAC ACGAACGCCC CAAAAGCAGC CCTGGTGGCT TAGGATTCTG GGTGTATCCG CGCTGGTTGG CGCACCGCTG ATCTGGTGGC TAAATGCTTA TCCACCCGCC CCCTATGGCA CGACAGCCAT GGACGAACGT ATCACCCGTT CATTTGAACA AACACCCCAG CTTGAACAGG TTCGTAACCG TGGCTACCTC AGAGTCGCTA CGCTGATCAG CCCCACCATC TATGTCCCCG ACAAGAATCA GACTCAAGGT CTGGAATACG ACCTTGTGAC GCGGTTTGCT GCAAGTTTAG GACTGGGTGT TCGATTTATC ATCGCCAAGA ACATCGATAA TGCCTATAAA CTCGTCGCCG AAGACAAAGC CGATTTCGCA GCAGCCGGTC TCGTGGTCAA TCTCGCCCGA GAGAACAAAT TTCGCTACGG CCCGAGTTAT CTATCCGTTC GGCGACAACT CATTTATCGA CAAGGCGTAG ATAAACCCAA AAATCTTCAG GATATCGGCA ACGCAACGCT TGCAGTCGAA CAGGGCTCCA GTAATCAGCA TTGGCTTGAT GAGCGCACTA AGGGTGGCGT GCTCGACATT TCACCGAACG ATGTGCCCGA TTCATCTGAT CTCACCCCAC CTGATGACGG CTACGCGATC CGCATCAAAT TAGAAGAAAG CAGTCTCGGT ACACTGGAGG CGCTGGAGAA TGGTACGGTC GATTACGGCA TTGTGTTGTC GCATGAAGCG ATGCTCGGGC AGAAATTATC GGACAAGATC AAGGTGGCAA CCGATCTTGG GCCTCCCGTA TCTTTTGCGT GGGCCTTTTC CCGTCTTGCC GATGAATCTC TACTGGACAA AGCACGCCAG TTTTTCGCTT CCATACGTGC CAACAATGAA CTCAAGAATC TGATCGATCG TCATTACGCC CAATTCGAGC AACTCGATCA ACAATTGGCA CAACAATTCA TCGAAGATGT GGACAAGCGT ATTTCACCTT ATCTGGCCGC ATTCAAGGCC GCGGGGAAGA AATACGACAT TGACTGGCGA TTGCTGGCGG CGATGGCGTA TCAGGAATCG AAATGGGACC CTGAGGCACG CTCCCATATG GGCGCATACG GCATCATGCA GATCACGGCG CCTACCGCAC AGGATATCGG TTTGATTGAC CCGGCCAATC CAGTGAAGAA CATCATGGCA GCCGCCAAAT ACCTGGACCA ACTCCGTGCA CTCATACCGG ATAACGCGAA GGAGCCTGAC CGTACCTATC TTGCCATGGC CGCCTATAAC GTAGGTATCG GCCATCTGAC CGATGCCATC AAGTTGACCA AAATACAGGG CGGTGATCCC AACCGGTGGC GAGACATCCG TGAACGACTG GCTCTTTTAT CTAATCCAAA GTATTACCGG AAGTTACGCA ACGGCTATGC CCGCGGGGAA GAGACGATCC AATATGTCGA GAACATTCGT GCATTGCACG ATCTTATGAT CTGGGTCGAA ACCCAACACA ACCTCATACG AGACGCAAAA CACTAG
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Protein sequence | MTQPEPTRTP QKQPWWLRIL GVSALVGAPL IWWLNAYPPA PYGTTAMDER ITRSFEQTPQ LEQVRNRGYL RVATLISPTI YVPDKNQTQG LEYDLVTRFA ASLGLGVRFI IAKNIDNAYK LVAEDKADFA AAGLVVNLAR ENKFRYGPSY LSVRRQLIYR QGVDKPKNLQ DIGNATLAVE QGSSNQHWLD ERTKGGVLDI SPNDVPDSSD LTPPDDGYAI RIKLEESSLG TLEALENGTV DYGIVLSHEA MLGQKLSDKI KVATDLGPPV SFAWAFSRLA DESLLDKARQ FFASIRANNE LKNLIDRHYA QFEQLDQQLA QQFIEDVDKR ISPYLAAFKA AGKKYDIDWR LLAAMAYQES KWDPEARSHM GAYGIMQITA PTAQDIGLID PANPVKNIMA AAKYLDQLRA LIPDNAKEPD RTYLAMAAYN VGIGHLTDAI KLTKIQGGDP NRWRDIRERL ALLSNPKYYR KLRNGYARGE ETIQYVENIR ALHDLMIWVE TQHNLIRDAK H
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