Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1238 |
Symbol | |
ID | 8534392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1340703 |
End bp | 1342544 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646383629 |
Product | glucosamine/fructose-6-phosphate aminotransferase, isomerizing |
Protein accession | YP_003263121 |
Protein GI | 261855838 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.851914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCGGAA TCGTGGCAGC CGTTGCCCAA CGACCGGTTT GGCCTATCCT CATCGAAGGG TTGCGCCGTC TTGAATATCG TGGGTACGAC TCGGCAGGTC TTGCCGTGCT TGATCCGGCT GGTGGGTTGA GTTCGGCGCG TGCAGTTGGC AAGGTTCAGG CCTTGTGCGA TCAGATCGGT GAGGAAGGGC TTGCCGGTTT CTCAGGCATT GCGCACACGC GTTGGGCAAC ACATGGCGTT CCAGCCGAAC GAAATGCCCA CCCGCATATC GCATCAAAGC GTGTGGCTGT GGTGCATAAC GGCATCATAG AAAATCATGC TGCCTTGCGT GAACAGATGG TGGCAGAAGG TCGGATATTC AGCTCAGATA CAGATACTGA AGTGATCGCC CATTTGCTCG ATCACTACCT TGTGGCAGGA CAAACACCGC AAAAGGCTTT TGAGCTGACG CTTGATCGGT TGCATGGCGC CTTTGCGCTC GCGATCCTGA TCAAAGATGT ACCGAACCAG ATATTCGTGG CGCGCCAAGG CAGCCCGCTG GTTATCGGTG TCGGGATTGG TGAACTGTTC GCAGCTTCAG ATGCTCTGGC ACTTTTGCCG GTGACGCAGC GATTTATTTA TCTGTGCGAA GGCGACCGGG CGATTCTTTC CTGTGATCAT CTCGAAGTGA CTGATCGCAC GGGGCAGATT GTCGCGCGTG CCATTGTGGA ATCCGCGCAG CGGGCAGACA GCGCGGGGCG TGGTGGCTAT AAGCATTTCA TGCTCAAGGA AATCCACGAG CAGCCGCGCG CTATTGCCGA TACACTTGAA GGCCGAATCA GTGAAGGGCG GGTTCTTCCT GCCGCGTTCG GCGTGAATGC CGAAGCCGTG TTCAAAACAA TCAAACGCAT CCAGATTGTC GCCTGCGGGA CGAGTTACCA CGCGGGCATG GTGGCGCGTT ACTGGTTTGA AGATATTCTT CGGTTACCCG CCGCAGTTGA GGTTTCTTCA GAATTTCATT ACCGCAATCC CGTCTTGGAA GAGGGAACGT TACTGGTCAT GCTCTCGCAG TCCGGCGAAA CGGCGGACAC CTTGGCCGCT TTGCGCATGG TACGGGTACG CAGTCCTCAA ATGCCCATTC TGGCAATATG CAATGCGCCG GAGTCATCTC TGGTACGTGA ATCCGATCTC GTCTTGATGA CGCATGCCGG CCCGGAAATC TCGGTCGCGT CAACCAAGGC TTTTTCGACC CAGCTCGTTG CGCTGGCCTT GCTGATGCTT TCCATCGGAC GTATCAGGGC TATCCTGAGC GAGCAGGACG AACGTCGGAT CGTGGCTGGT CTTGAGAAAA TCCCAAATCT TGCCCGTGAT GCCCTGCAAC ACGATGAGGC CATCATGGCC TTGGCCGAGC GATTGGTCGA TAAGCAGCAT GCGCTTTTCC TGGGGCGTGG CGTGATGTTC CCAATCGCGC TGGAAGGTGC GTTGAAGCTT AAGGAAATCA GTTATATACA CGCGGAAGGT TATCCGGCGG GTGAGCTCAA GCACGGTCCG CTGGCGCTGA TCGACGAGAA TATGCCGGTG ATCACCATTG CCCCCCAGAA CGACCTGCTT GATAAACTCA AATCGAACAT GTCGGAGGTT GCTGCACGGG GCGCGGAGTT GTTCGTATTT GCAGATGAAC GATCCGGATT GCGCACAGAA GCGCGCTTGC ATGTATTGCC GGTTACATCC CACGTTGGCA GGATATCTGC GCCGATCATT TTCAATTTGC CGCTGCAATT ATTGGCTTAT CATGTCGCCG TATTGAAAGG CACCGATGTG GATCAGCCAC GTAATCTTGC CAAATCGGTC ACAGTAGAAT GA
|
Protein sequence | MCGIVAAVAQ RPVWPILIEG LRRLEYRGYD SAGLAVLDPA GGLSSARAVG KVQALCDQIG EEGLAGFSGI AHTRWATHGV PAERNAHPHI ASKRVAVVHN GIIENHAALR EQMVAEGRIF SSDTDTEVIA HLLDHYLVAG QTPQKAFELT LDRLHGAFAL AILIKDVPNQ IFVARQGSPL VIGVGIGELF AASDALALLP VTQRFIYLCE GDRAILSCDH LEVTDRTGQI VARAIVESAQ RADSAGRGGY KHFMLKEIHE QPRAIADTLE GRISEGRVLP AAFGVNAEAV FKTIKRIQIV ACGTSYHAGM VARYWFEDIL RLPAAVEVSS EFHYRNPVLE EGTLLVMLSQ SGETADTLAA LRMVRVRSPQ MPILAICNAP ESSLVRESDL VLMTHAGPEI SVASTKAFST QLVALALLML SIGRIRAILS EQDERRIVAG LEKIPNLARD ALQHDEAIMA LAERLVDKQH ALFLGRGVMF PIALEGALKL KEISYIHAEG YPAGELKHGP LALIDENMPV ITIAPQNDLL DKLKSNMSEV AARGAELFVF ADERSGLRTE ARLHVLPVTS HVGRISAPII FNLPLQLLAY HVAVLKGTDV DQPRNLAKSV TVE
|
| |