Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1087 |
Symbol | |
ID | 8534234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1173726 |
End bp | 1174253 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383471 |
Product | transcription elongation factor GreB |
Protein accession | YP_003262970 |
Protein GI | 261855687 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.421268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACGG CGGTCATTTC CGCGCGTGGA CATGCACGTT TGCTGGCGGA GCTCGATCAA CTGTGGCGCG TGGAGCGACG TCTTGTCGTT CAGGCTGTTT CCGAAGCCGC TGCTTTGGGC GACCGCTCGG AAAATGCCGA GTACATTTAT GGCAAGCGGC GTTTGCGCGA AATCGATCGT CGCATTCGTT ATCTGCAAAA GCGGTTGGGT GACATCAAGG TGGTGCGCCA GCCGCCTACC GACATGAACA AGGTCTATTT TGGTGCTCGA ATCACTTTGC TTTACGCTGA TGATCGGGAG CAAACGGTTT GCCTCGTCGG GCCTGACGAG ATCGATCCGG CAAACCAACT GATCAGCATC GATTCCCCGC TTGCCAAAGC AGTGCTTGGC AAGGCGTTGG ATGCAGAAGT TGTGCTCTTC TTGCCAAGTG AAACTTCCAC GCCGCGCCGT GTTCATGCTG AGATCATTGC CATCGAATAT CCCTCAGAAC TGCACCATGC AGAAATCCAC ATTACTTCGC AAAGCTAA
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Protein sequence | MSTAVISARG HARLLAELDQ LWRVERRLVV QAVSEAAALG DRSENAEYIY GKRRLREIDR RIRYLQKRLG DIKVVRQPPT DMNKVYFGAR ITLLYADDRE QTVCLVGPDE IDPANQLISI DSPLAKAVLG KALDAEVVLF LPSETSTPRR VHAEIIAIEY PSELHHAEIH ITSQS
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