Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0839 |
Symbol | |
ID | 8533980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 911096 |
End bp | 912205 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646383226 |
Product | inner-membrane translocator |
Protein accession | YP_003262731 |
Protein GI | 261855448 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAGAT TGGAACGCAG GCCCCTGCCC TCGCGGGCGA TGATGTTCGC TTCGCCCTTG ATTGCGGCGC TCTTGATGCT GGTGACAGGC TACATTCTGT TCAGCATCAT GGGCAAAGAT CCTCTGCAGG CCTTCTGGGT ATTTTTCATT AAGCCACTGA CCACGTCCTA CGGTGTCAGT GAGTGGTTGC TGAAATCAAC ACCGTTGATT CTCTGCGGGG TTGGGCTAGC CATCGGTTTT CGTGCACGGG TGTTCAATAT TGGTGCCGAA GGTCAGTTCA CGATGGGGGC CATCGCCGCT GGCGGCGTCG CACTGTATTT CTACAACACG GAAGCCATCT GGGTGTTGCC GTTGATGATG CTGGCCGGTG TTCTGGGGGG TATGGCCTGG GCCGCGATTC CCGCCTTTCT GCGCACCCGT TTTAACACCA ACGAAATTTT GGTCACCTTG ATGCTGGTGT ATGTGGCGCA GTTATTCCTT GGTTATCTGG TTCAGGGTCC ATGGCGTGAT CCAGAGGGCT TTAACTTCCC GCAATCGAAG ATGTTCACTG ATGCTGAAAC CGTACCGGCG TTGATCGAGG GTTTCCGGGT GAATTGGTCC TTTATTGTTG CTTTGGTGCT GGTGGCCGTT TCCTGGTTCT TCTCCTTCAA GATGTTTGCC GGATTCCGAA TGGAAGTCAG CGGGCAAGCA CCCGATGCGG CGCGTTACGC CGGGTTCAGC GAGAAGCGTA ATGTTTGGTT TGCGCTTCTG ATCAGTGGCG GTCTGGCTGG TTTTGCTGGC ATGGCCGAGG TCGCAGGGCC GATCGGCCAG TTACAACCCA CCATTTCGCC CGGTTATGGA TTCGCCGCAA TCATCGTTGC TTATGTAGGT CGCCTACATC CATTGGGCGT CCTTTTGGCG AGCTTGCTGC TGTCCCTGCT TTACCTTGGT GGCGATACGG CGCAGATGGA TTTGAACCTG CCTTCGGCCA TTACCGGATT GTTCCAGGGA TTATTGCTGT TCTACCTGTT GGCCGCCGAT ATTTTTATTC ACTACCGGTT AAAGCCTGAT CCGAGTGACG CACGTAAACC TATGGCGCCC CCACCGGAAC CCGAAGGAGA TATCACATGA
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Protein sequence | MPRLERRPLP SRAMMFASPL IAALLMLVTG YILFSIMGKD PLQAFWVFFI KPLTTSYGVS EWLLKSTPLI LCGVGLAIGF RARVFNIGAE GQFTMGAIAA GGVALYFYNT EAIWVLPLMM LAGVLGGMAW AAIPAFLRTR FNTNEILVTL MLVYVAQLFL GYLVQGPWRD PEGFNFPQSK MFTDAETVPA LIEGFRVNWS FIVALVLVAV SWFFSFKMFA GFRMEVSGQA PDAARYAGFS EKRNVWFALL ISGGLAGFAG MAEVAGPIGQ LQPTISPGYG FAAIIVAYVG RLHPLGVLLA SLLLSLLYLG GDTAQMDLNL PSAITGLFQG LLLFYLLAAD IFIHYRLKPD PSDARKPMAP PPEPEGDIT
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