Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0435 |
Symbol | |
ID | 8533557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 457064 |
End bp | 457846 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646382814 |
Product | Flagellar assembly protein FliH/Type III secretion system HrpE |
Protein accession | YP_003262339 |
Protein GI | 261855056 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00322204 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAGTT CGTCTGATCC CGTGCAGTCT GCCACAGTTG ATGAAGTGCC CTTGGTGCGC CCGTTGACCG CTGGGGCAGA CGCATCGGCT ATTTCGGCCT GGGCCTTGCC GGATTTCGAT GTACCAGAGG CGCCATCGGA AGTCCTGAGC GAGCCGCTCG ATCCTCATGC AGAGGAACTG GCTCGAGCGC GCCAAGTGGC CGAACAGGCC GGTTTCGCAG CGGGGCATGC TCAAGGTGAA AAGGCTGGCT TTGCAGCGGG TCATGCCGAA GGTCTGGCCG CTGCTTTAGC CGAGCAAACG CACATTCAAC AGCGATTCCA AGGGTGGTTG CAGTCGCTGA CACAACCCCT GGCCGATCTG GATGCAGAAG TCAGTCTGCA AATGGCCCGT CTGGCCGCCC AGATGGCCCG CGCCATTATT TATCGCGAAT TGACCATCGA GCCCGAGCAT CTGGACGTGG TCGCTCGCAC AGCGATCGAA GCGTTGCCGG TGGCCGTGCG CGCCGTCACG CTGGTCTGCC ATCCCGACGA TGCCGACGCC TTGCAGGCCG CCGTCGATCA GGACACGATT CAAAGTCAAC ATGCCCAAAC CGTTACCGTG CGCCGCGATG CGACGGTGAC GCCGGGCGGT TTGATGGTCG AATCGAACAC CGTGGGCGTG GAGTCGCTCG TGGACGCCAG TCTGGAAGCC CGCTGGGCCG CACTTTGCCT GCGCGTACTC GATGAGCAAG TGGCAGGCCC AGCCGATCCT ATCGAGACTG AAATGAACGA GGCTGCCGAA TGA
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Protein sequence | MKSSSDPVQS ATVDEVPLVR PLTAGADASA ISAWALPDFD VPEAPSEVLS EPLDPHAEEL ARARQVAEQA GFAAGHAQGE KAGFAAGHAE GLAAALAEQT HIQQRFQGWL QSLTQPLADL DAEVSLQMAR LAAQMARAII YRELTIEPEH LDVVARTAIE ALPVAVRAVT LVCHPDDADA LQAAVDQDTI QSQHAQTVTV RRDATVTPGG LMVESNTVGV ESLVDASLEA RWAALCLRVL DEQVAGPADP IETEMNEAAE
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