Gene Hneap_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0169 
Symbol 
ID8533284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand+ 
Start bp172415 
End bp172978 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID646382547 
ProductRhomboid family protein 
Protein accessionYP_003262079 
Protein GI261854796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.406273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC GTAACCAAAA GTGGCTTATT TCTTTTCTTG TCGTTGCGAT TGCCGTTGCG 
ATCCTGCTGT TACACGGCGG TAATGAACTG CGTTACGACC GTGCAGATAT TCTACATGGT 
CAATTCTGGC GGGTATTTAC CGGAAATTTC GTGCACGCCA ACTGGCGCCA TCTTGCCTCT 
GACATGGCTG GTCTTTTGAT TTGGACGGCA TTGGCCGGTT ATCTTGAAAC ACGCCGCAGC 
TACCTTGTTC TTTTGGCAGG CACCGGTTTG GGGGTCGGGG TGGGATTGTT GCTGCTTGAT 
CCGCACGTCG GCTGGTATGT CGGGCTCTCC GGAATTTTGC ACGGGCTGTT CGCGGCTAGC 
GCCATTCGGC TGCTGTCGCG CAAGGAGTGG TTGGGCGGAT TCGCGCTACT GGCGGCGTTG 
ACACTCAAGA TTCTTTGGGA ACAACGTTAT GGTGATCTCG GAACGGCCAA GCTGCTCGGC 
GTGCCCGTTC TGGTTGATGC CCATCTGTAT GGTGCGGTGA CGGGGGCGGT TATCGTGCTG 
GCACTGTTGT TCTTCCGTCG TTGA
 
Protein sequence
MTDRNQKWLI SFLVVAIAVA ILLLHGGNEL RYDRADILHG QFWRVFTGNF VHANWRHLAS 
DMAGLLIWTA LAGYLETRRS YLVLLAGTGL GVGVGLLLLD PHVGWYVGLS GILHGLFAAS 
AIRLLSRKEW LGGFALLAAL TLKILWEQRY GDLGTAKLLG VPVLVDAHLY GAVTGAVIVL 
ALLFFRR