Gene Hmuk_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3373 
Symbol 
ID8409451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp175498 
End bp176016 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID645018296 
Productcytochrome c oxidase subunit II 
Protein accessionYP_003175817 
Protein GI257373043 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.208365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCC ACAGATTTGA ACGCATCTGG CTGGTGGGAT CGCTGCTGTT GATCGCTCTG 
TTCGTCGCGA CGGTGACCTA CGGGGCCGTC GGTGCTGGCT ACGGGATGGT CGACGCGGAG
GGTGGACAGG TCGACGGGAC CGACCCCACC GCGAGCGAGA ACGTCCGCGA ACCCGGTGTC
TACAACGGGA GCGAAGACGG CCACTACGAC GTCTACGTCG AAACGCAGCG GTTCCTGTTC
GTCCCCGGAA CGAACGAGCC AATCCGCGTG CCAGCCAACA GTACCGTGAC GTTCCACGTG
ACCAGCCGTG ACGTCCTCCA CGGGTTCGAG ATCGTCGGCA CGAATATCAA TACGATGACT
GTTCCGGGAC AGAAGGCGAT GGTCACGGCC GAGTTCGACG AGCCCGCGGA GTACGGCATC
GTCTGTAACG AGTACTGTGG CAGCGGCCAC CACACGATGG AGGGATCACT GCAGGTGGTC
CCACCGTCGG AGTTCAACGA GACGAGTGAG GTGCAGTAA
 
Protein sequence
MHVHRFERIW LVGSLLLIAL FVATVTYGAV GAGYGMVDAE GGQVDGTDPT ASENVREPGV 
YNGSEDGHYD VYVETQRFLF VPGTNEPIRV PANSTVTFHV TSRDVLHGFE IVGTNINTMT
VPGQKAMVTA EFDEPAEYGI VCNEYCGSGH HTMEGSLQVV PPSEFNETSE VQ