Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3046 |
Symbol | |
ID | 8412599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2932619 |
End bp | 2933791 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645021393 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003178858 |
Protein GI | 257389085 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0751407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTCGTC GAACGGTCTT CGGGTCGTTG CTGGGGCTCG TCTTCCTGGT CAACCTCGCA CGGGTCGTGT TCGCGCCCCT GCTGGAGCCA CTCGGTACCG CGCTCGACGC CAACGACGCC GCGCTGGGGA CCATCGCGAC GCTCGCGTGG CTCGGGAGCG CACTGCCTCG CATCCCGACT GGCTACCTCC TGACGCACAT CTCTCGCAGC GTCGTCATCC TCGCGTCCTC GGGAATCCTG GCGGTCGCGG CCGTCGCCAC GTCGCTCGCC AACAGCGTCC CGGCCGTGAT GGTGGGGGCC TTCCTGATGG GACTGGCCAG CGGCTCGTAC TTCATCGCGG GCAATCCCCT GGCGAGCGAA CTGTTCCCCG ACCGGGTCGG CTCGACCCTG GGTATCCACG GCACCGCCAG CCAGCTCGCC GCCGTCAGTG CACCGGCGAT CGTCGTTGCC GCTCTGGGCG TCGGCGACTG GCGCACCGTG TTCCGAGCGA TGGCCGTCGC CGCCGTCGTC TCCGGGATCG CCTTCGCCCT CACCGCTCGT CGGACGGAGA TGCCCGACGC CGGTGCGGAA GACACCGCCT TCCTGGCGGC CGCGCGCCAC CAGTGGCGGA TCGTGCTCGC GGGCGTGGCC GTCATCGGCG TCACGGGGCT GGTCTGGAAC GGCCTGTTCA ACTTCTACGT GAAGTACTTC CTCGCGAAGG GGCTGACCGG TGCCCAGGCG AACCAGTTGC TGACGATCGC GTTCGGCGCT GGCGTGCCGG CTTTCTTCGT CTCCGGGCGG CTGGCCGACC GACTGCCGGT GTTGCCCTAC ATCCTCTCGA TCATCGGCGG GTTCCTGCTC TCGGTCTACG CGACGACGCT GCTGTCCGGC TATCTCGGGC TGGCGGTCCT CAGCGCCGTT CTCGGCTACG TGATCCACAG CCTCTTTCCC GCGGTCGACA CGTACCTGCT GGGCTCGCTC CCGGACCACC ACCGCGGGAG CGCCTACGCC GTCTACAGCG GGACGATGAT GATCATCCAG GCCTCGGGAA GTACGATCGT CGGCAGCCTC TCGTCGGCCG GCTACTCCTT CGAGACGATC TTCACCTGGC TGGTGGCGGT GCTCGCGGCG GTGTTGCTCG GGCTCACGGG ACTGTACGTC GACGGCCAGC TTCCGACCGG CGCACGGGCG TAG
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Protein sequence | MSRRTVFGSL LGLVFLVNLA RVVFAPLLEP LGTALDANDA ALGTIATLAW LGSALPRIPT GYLLTHISRS VVILASSGIL AVAAVATSLA NSVPAVMVGA FLMGLASGSY FIAGNPLASE LFPDRVGSTL GIHGTASQLA AVSAPAIVVA ALGVGDWRTV FRAMAVAAVV SGIAFALTAR RTEMPDAGAE DTAFLAAARH QWRIVLAGVA VIGVTGLVWN GLFNFYVKYF LAKGLTGAQA NQLLTIAFGA GVPAFFVSGR LADRLPVLPY ILSIIGGFLL SVYATTLLSG YLGLAVLSAV LGYVIHSLFP AVDTYLLGSL PDHHRGSAYA VYSGTMMIIQ ASGSTIVGSL SSAGYSFETI FTWLVAVLAA VLLGLTGLYV DGQLPTGARA
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