Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2894 |
Symbol | |
ID | 8412446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2775797 |
End bp | 2779834 |
Gene Length | 4038 bp |
Protein Length | 1345 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645021240 |
Product | DNA polymerase B exonuclease |
Protein accession | YP_003178706 |
Protein GI | 257388933 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.182169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC AGGGCCAGCA GGACCTCGGC GCGTTCGTCG ACAGCGACGA CACTGACGAC GAGCGCGACG TTGCCCAAGA GGCAGCGGCG GTCGCCGGCA CGAGCGCGTC GACCGCCGAC GTGGTCGACG CCAGCGACCG GCTCTTCGAG GACGTCGAGG AGACGGTTTC GATGGCCGTC ACCCAGATCG ACTACACCAT CGAGGGGCGC GGCGACGACG AGTATCCAGT CATCCACGTT TTCGGCCGAA CTGAGTCCGA GGACGCCGTC CACGCCCGCG TCTACGACTT TCGACCGTAC TTCTACGCGC CCGCAGAGAA CGTCACGGAG GAGCGACTGC GAGGCTACGA CAGCATCACT GGCTGGGAGG AGACCGACGC AGACGGCGAT CCCTACGAGT CGATCCGAGG CGAGCGACTC GTCAAGATCT TCGGTCGGAC GCCCCGTGAC GTGGGACAGA TCCGCGACGA GTTCGACCAC TACGAGGCCG ACATCCTCTT TCCCAACCGA TTTCTCATCG ACAAGGGACT CACCAGCGGT GTCGAAGTCC CGCTCAGAGA GGACGACGAC GGCAGTCTCC GGGTCCATCA CGCGGAGGTC GCGCCCGCGA ACGTGCAGGC GACACCGCGG GTGAACGTCT TCGACATCGA GGTCGACGAC CGCTCGGGGT TCCCCGAGGA CGGCGAGGAG CCGATCGTCT GCCTGACCAG TCACGACTCC TACCGCGACG AGTACGTCCT CTGGCTGTAC GAGGCCCCCG ACGGGATCGA AGGGCCGGAC CATCTCCCCG ACTACGAGCC TATCGAGGGC GAGATCGACG CCGAGATTCG AAGATTCACC GAGGAGGAGG CGATGCTGGA GGCCTTCGTC GACTACATCG ACGAGACGGA CCCGGACATC CTCAGCGGGT GGAACTTCGA CGACTTCGAC GCGCCGTACT TCCTCGACCG ACTGGAAGAA CTGCAGGGCC CACACCACGA CTACGACCTC AGTGTCGACC GCCTCTCGCG GGTGGACGAG GTCTGGCGCT CGGGCTGGGG CGGCCCCGAC ATCAAGGGGC GAGTCGTCTT CGACCTGCTG TACGCCTACC AGCGCACCCA GTTCAGCGAA CTCGACTCCT ACCGGCTCGA CGCGGTCGGC GAGGTCGAAC TGGGCGTCGG CAAGGAACGC TATCCCGGCG ACATCGGCGA CCTCTGGGAA GACGACCCCG AGCGCCTGCT GGAGTACAAC CTCCGGGACG TGGAGCTCTG CGTCGAACTC GACCGCGATC AGGACATCGT CGCCTTCTGG GACGAGGTCC GCACCTTCGT CGGCTGTAAG CTCGAAGACG CCACCACGCC CGGTGACGCC GTCGACATGT ACGTCCTGCA CAAACTCCAC GGCGAGTTCG CACTCCCCTC GAAGGGCCAG CAAGAGAGCG AGGACTACGA GGGCGGGGCC GTGTTCGACC CCATCACCGG TGTCAGGGAG AACGTGACGG TGCTGGACCT GAAGAGCCTC TATCCGATGT GCATGGTGAC GACCAACGCG AGCCCCGAGA CGAAGGTCGA CCCGGAGGCC TACGACGGCG ACACCTACCG CGCGCCCAAC GGGACCCACT TCCGGAAGGA ACCGGACGGC GCGATCCGGG AGATGGTCGA CGAACTCCTA TCAGAACGCG AGGAGAAAAA GTCGCTTCGG AACGATCACG ACCCGAAAGA GGACGCCTAC GAGCGCTACG ACCGGCAACA AGCGGCGGTG AAGGTGATCA TGAACTGCTT TACGCCGGAC ACCGAGGTCG TCACGCCCGA GGGCGTTCGC GACATCACGG ATCTCGAAGT CGGCGACGAA GTGTACTCTC TCGATCCGGA AACGATGCGC ATGGAGGTCA AGCCGGTCGT CGAGACCCAC GACTACCCCG ACTATCGGGG CGACCTCGTC GACATCGAGA CGAGTAAGAT CGACTTCCGA GTGACGCCGA ACCACCGGAT GCTCGTCCGG AAGAACGAGA CAAACGGGAT CACCGAAGAC GAGTACGGGT TCGTCGAAGC GGGCGAACTC GATCGAGCGA CGAACTACGA ACTGCCCCAC GACTGGGACG GTCCCGACGG TGAGCGGCTC AACGAGGTGG ATCTCGTCGA CATCCTTGAG GGTGCGTTCG AGGTATGGTG TGACAACGAC GACCACGGAC ACACTCTTGC CGCAGAGGTT GGGTACCGTC CGGACAAGAT GCAAAAGCAG GGTGAAGACG GGACTGGCTA CGTGTTTGAC GCCGAATCGT TCCGGGAGCA CCGTGCGTAT ATTGATGAGA GCTGTTCAGG GTTTTACGTC CACTCTGAGC GCGGTCGCAA GTGGATTCCA CGGTTTTACG ACGGTGACGA CTTCCTCGAA CTGCTGGCGT GGTACATCAC CGAAGGAAGC ATCTACACAT CTGCGGATAA GCAGTTTGGT GAGCATTTCC GAGGTAGTTC AACAACAGTG AACATTGCAC AGGATGCGGT CCCGGACGGA GGATCTGGTG ACGACCACAC ACGGATAGGC AGCCTCCTCG ACGGCATGGG GTTCGATGCG TACGTCGACG AGAAAGGGTA CCAGTTCACT TCGAAACTGC TTGGTGATCT CTTCGAACGG CTCTGTGGTA GCGACAGCTT CGAGAAGCGG ATTCCCGAGT TCGTGTTCGA AACAAGCCAA GCACAGAAAC GGACCTTCCT TGATACGCTT ATCGCTGGCG ACGGGGACTG GCAGACCAAC AGTTGGCGCT ACAGCACTGC AAGTGAACGG CTCCGCGACG ATGTCTTACG ACTCTGTGCT CATCTCGGAC TCACCGCCAG CTACAATGAA GACAGTGGAA CGTACCGCAT CTACGTCACC GAAGACAGCA AGAACACGCT CCGGATGCAC CGGAGTGGCG GTGAAAGCAC GGCTGAAAAC GGTGTTCACT GTGTCACGGT TGAGGACAAC CACACTCTGC TCGCCGGGCG GAACGGGAAA TTCCAGTTCG TCGGTCAGTC GCTCTATGGT GTCCTCGGAT GGGATCGGTT CCGTCTATAC GACAAGGAGA TGGGGGCGGC CGTCACGGCG ACCGGTCGCA AGGTGATCGA TTACACCGAC GAAGTCGTCG CCAGAGAGGG GTACGAGGTC GTCTACGGGG ATACTGACAG CGTCATGCTA CAGGTCGGAG ACATCGGCCC GGACGACGTC GAAGGCGACG TTGTGGTCAC CGACGAGATG CGGGCAAAAC ACCCCGAGAT GGACGACGGC GAACTGGAAA CCGTCGCGGC GACGATCCAG AAGGGGTTCG AACTCGAAGA GACGATCAAC GAGGCCTACG ACGATTTTGC CCTCGAAGAA CTCAACGCGC AGTTTCACCG CTTCCAGATC GAGTTCGAGA AGCTCTATCG GCGCTTCTTC CAGGCGGGCA AGAAGAAGCG CTACGCCGGC CACATCGTCT GGAAGGAGGG CAAAGACGTC GACGACATCG ACATCACCGG CTTCGAGTAC CAGCGTTCGG ACATCGCACC GATCACCAAG CGCGTCCAGA AGGAGGTCAT CGACATGATC GTCCACGGCG AGGACGCCGA CACGATCAAG GAGTACGTCC ACGACGTGAT CGAGGACTAC CAGGCCGGCA ACGTCGACCC CGAAGACGTG GGTATCCCCG GCGGCATCGG CCAGAAACTC GACAGCTACG ACACCGACAC GGCCCAGGTG CGCGGGGCGA AGTACGCCAA CATGCTGCTG GGGACGAACT TCCAGAGCGG CTCGAAACCC AAACGGCTCT ACCTGGATCG AGTCCATGAC GACTTCTTCC AGCGGATCGA GGCCGAGAAG GGACTCGATC CCGCCGAGGA TCCGCTGTAC GGCGAGTTCC GCCGCGACCC GGACGTGATC TGTTTCGAGT TCGCCGACCA GATTCCCGAA GAGTTCGAGG TCGACTGGGA GAAGATGCTC GACAAGACGC TGAAGGGTCC GATCGCCAGG ATCCTCGAAG CGATGGGTAT CTCGTGGGAC GAGGTCAAGT CCGGCCAGGA ACAGACCGGC CTCGGCCAGT TCATGTGA
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Protein sequence | MSEQGQQDLG AFVDSDDTDD ERDVAQEAAA VAGTSASTAD VVDASDRLFE DVEETVSMAV TQIDYTIEGR GDDEYPVIHV FGRTESEDAV HARVYDFRPY FYAPAENVTE ERLRGYDSIT GWEETDADGD PYESIRGERL VKIFGRTPRD VGQIRDEFDH YEADILFPNR FLIDKGLTSG VEVPLREDDD GSLRVHHAEV APANVQATPR VNVFDIEVDD RSGFPEDGEE PIVCLTSHDS YRDEYVLWLY EAPDGIEGPD HLPDYEPIEG EIDAEIRRFT EEEAMLEAFV DYIDETDPDI LSGWNFDDFD APYFLDRLEE LQGPHHDYDL SVDRLSRVDE VWRSGWGGPD IKGRVVFDLL YAYQRTQFSE LDSYRLDAVG EVELGVGKER YPGDIGDLWE DDPERLLEYN LRDVELCVEL DRDQDIVAFW DEVRTFVGCK LEDATTPGDA VDMYVLHKLH GEFALPSKGQ QESEDYEGGA VFDPITGVRE NVTVLDLKSL YPMCMVTTNA SPETKVDPEA YDGDTYRAPN GTHFRKEPDG AIREMVDELL SEREEKKSLR NDHDPKEDAY ERYDRQQAAV KVIMNCFTPD TEVVTPEGVR DITDLEVGDE VYSLDPETMR MEVKPVVETH DYPDYRGDLV DIETSKIDFR VTPNHRMLVR KNETNGITED EYGFVEAGEL DRATNYELPH DWDGPDGERL NEVDLVDILE GAFEVWCDND DHGHTLAAEV GYRPDKMQKQ GEDGTGYVFD AESFREHRAY IDESCSGFYV HSERGRKWIP RFYDGDDFLE LLAWYITEGS IYTSADKQFG EHFRGSSTTV NIAQDAVPDG GSGDDHTRIG SLLDGMGFDA YVDEKGYQFT SKLLGDLFER LCGSDSFEKR IPEFVFETSQ AQKRTFLDTL IAGDGDWQTN SWRYSTASER LRDDVLRLCA HLGLTASYNE DSGTYRIYVT EDSKNTLRMH RSGGESTAEN GVHCVTVEDN HTLLAGRNGK FQFVGQSLYG VLGWDRFRLY DKEMGAAVTA TGRKVIDYTD EVVAREGYEV VYGDTDSVML QVGDIGPDDV EGDVVVTDEM RAKHPEMDDG ELETVAATIQ KGFELEETIN EAYDDFALEE LNAQFHRFQI EFEKLYRRFF QAGKKKRYAG HIVWKEGKDV DDIDITGFEY QRSDIAPITK RVQKEVIDMI VHGEDADTIK EYVHDVIEDY QAGNVDPEDV GIPGGIGQKL DSYDTDTAQV RGAKYANMLL GTNFQSGSKP KRLYLDRVHD DFFQRIEAEK GLDPAEDPLY GEFRRDPDVI CFEFADQIPE EFEVDWEKML DKTLKGPIAR ILEAMGISWD EVKSGQEQTG LGQFM
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