Gene Hmuk_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2714 
SymbolsucC 
ID8412265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2600850 
End bp2601998 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID645021060 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_003178527 
Protein GI257388754 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0773834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC ACGAGTACCA GGCGAAGCAG GTCTTCGCCG ACGCGGGGGT TCCGACGCCC 
GCATCGACGC TGGCGACGAC CGTCGACGAA GCGGTCGACG CCGCCGAGGA GATCGGCTAT
CCGGTCGCGA TCAAGGCACA GGTGCAGGTC GGCGGCCGCG GGAAGGCCGG CGGGATCAAG
CTCGCCGAGA ACGCCGACGA GGCCCGTGAG TACGCCGACG ATATTCTCGG GATGGACCTC
AAGGGGCTCC ACGTCGACCG CGTCCTCGTC GAAGAGGCCG TCGACTTCGT CAACGAGCTG
TACGTCGGCG TCACGATGGA CCGCGGCGAG GGCAAGCCCG TCGCGATGGT CTCGACGCGC
GGCGGCGTCA ACATCGAGGA AGTCGCCGAA GAAGAGCCAG AGGCGATCGC CCGCGAGCAC
ATCGATCCGG CCTTCGGCAT GCACCACTAC CAGGCCCGGA AGGTCGTCTA CGACGCCGGT
GTCGACCGCG AGGTCGCCAA CGACGTTGCC GGCGTCCTCA AGACGCTGTA CGACCTCTGG
GAGGACAAAG ACGGCTCCGA CGCCGAGATC AACCCGCTGA TGGTCACGGC CGACGACGAG
GTCATCGCGG CCGACGCCGT GATGAACGTC GACGACGACG CCCTGTTCCG TCACCCCGAT
CTGGAGGCGA TGGAAGACGA GGCCGACGGC GGCGACGAAC TCGAACAGAA GGCCGACGAG
TACGGCTTCG ACTACGTCCG CCTGTCGGGC AACGTCGGCA TCATCGGCAA CGGTGCCGGG
CTGGTCATGA CGACGCTCGA CCTCGTCGAC CACTTCGGCG GCGAGCCGGC GAACTTCCTC
GACGTGGGCG GCGGTGCGAA GGCCCAGCGG ATCGCCAACG CGCTCGATAT GGTGTTCTCC
GACGACAACG TCGACTCCGT CGTGTTCAAC ATCTTCGGCG GGATCACGCG GGGCGACGAG
GTCGCCAAGG GAATCAACCA GGCGCTCGAA CAGTTCGACG AGATTCCCAA GCCCGTCGTC
GTCCGACTCG CGGGCACCAA CGCTACTGAA GGGATGGAGA TTCTCAACGA AGACCTCGTG
ACGGTCGAAC AGACGCTCGA AGACGCCGTC GAACGTGCCG TCATCTACGC CGAGGAGGTG
GAAGCATGA
 
Protein sequence
MKLHEYQAKQ VFADAGVPTP ASTLATTVDE AVDAAEEIGY PVAIKAQVQV GGRGKAGGIK 
LAENADEARE YADDILGMDL KGLHVDRVLV EEAVDFVNEL YVGVTMDRGE GKPVAMVSTR
GGVNIEEVAE EEPEAIAREH IDPAFGMHHY QARKVVYDAG VDREVANDVA GVLKTLYDLW
EDKDGSDAEI NPLMVTADDE VIAADAVMNV DDDALFRHPD LEAMEDEADG GDELEQKADE
YGFDYVRLSG NVGIIGNGAG LVMTTLDLVD HFGGEPANFL DVGGGAKAQR IANALDMVFS
DDNVDSVVFN IFGGITRGDE VAKGINQALE QFDEIPKPVV VRLAGTNATE GMEILNEDLV
TVEQTLEDAV ERAVIYAEEV EA