Gene Hmuk_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1592 
Symbol 
ID8411114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1517206 
End bp1518381 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content67% 
IMG OID645019918 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003177413 
Protein GI257387640 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGGG ACAAACGCGG CTATCAGTTG CTGTATTTCG TCTTCTTCGC TTCCTCGAAC 
GGTTTCGTCG TCTTCCGGAA CGCCTACTTC GAGGAACTCG GACTGACCGG GGGGCAGATG
GGGCTGTTGG GTGCGCTGCT CGTCGTCGGC GGGATGATCG CCCAGCCGAT CTGGGGCGGC
GTGGCCGATC GCTTCGCCGC CTCCAAACCG GTCCTGTTGA TCGCGGCCGG GGTGTCGAGC
GTGGCCGTTC TCGCCTTCCC GCTGGCCGGG CGCGTCCCCG ATCCCTTCCT CTTGCTCGTG
CTGGCGACGG CGCTGCTCTC GACGGTGCGG TCACCGATCG TTCCGATCAC CAACGCGATG
ATCCTCTCCC GTGGCGTCGA CTACGGACAG GTCCGGGCCT TCGGCTCGAT CGCGTTCGGA
CTGGGGAGCC TCGTCATCGG GTGGCTGCTC TCGCGGTTCG CGACGGAGAT CGTCTTCTAC
ATCTACGCGG TCGGGATGGT CGTGCTGATC CTGATCGTCC GCAGCGTGCC CGACGCCGAC
GCCGACCTGA CGCCGGATCT CCGACGGGAG GCCGTCAAGC TCCTGCGCAA CCGACGGTTC
CTGCTCTTGC TCGGCGTCGC GGTGCTGCTG GGTGGGGCCA GTTCCTCGGG CAGCGCCTAC
TTCTCGGTGT ACGTTCGGGC GATCGGTGCG CCGGACAGCC TCACGGGGAC GGCGTGGATG
GTCAAGACCG TCGGCGAGGC CGTCATCTTC CTCTCGATGG CCAAGATCGG GCTCGCCAAC
CGCACGCAGC TCTCGCTCGG TGCCGCCCTC TTTGCCGGCT GTTACCTCGT CTACGCCGCC
GTGGGAACGG CGACGGCGAT CATGGCGGTC CAGCTGGTGC TGGGCGTCGG GCTGGCGCTG
TACAACCTCG CCGTCGTCGA GTTCGCCCAC CGCTTCTCGC CCGACGAGCT GACCTCGACG
GGACAGGCGG TGCTGTCGGC CTTCGGGATC GGGACCGGGC GCGCGCTGGG ACAACTGGGT
GCCGGGAACG TGATGGACCT CGTGGGCGTC CAGTCGATGT ACTTCGTGCT ATCGGCGCTC
GCGGCCGCCG CCCTCCTGTT GAGCCTGGGC TTTCACGGCC CGGCGTTGCG GCGGGTTGGC
AACGCTGCCG GCGTCGGACG GTATAGTAAC AATTGA
 
Protein sequence
MLGDKRGYQL LYFVFFASSN GFVVFRNAYF EELGLTGGQM GLLGALLVVG GMIAQPIWGG 
VADRFAASKP VLLIAAGVSS VAVLAFPLAG RVPDPFLLLV LATALLSTVR SPIVPITNAM
ILSRGVDYGQ VRAFGSIAFG LGSLVIGWLL SRFATEIVFY IYAVGMVVLI LIVRSVPDAD
ADLTPDLRRE AVKLLRNRRF LLLLGVAVLL GGASSSGSAY FSVYVRAIGA PDSLTGTAWM
VKTVGEAVIF LSMAKIGLAN RTQLSLGAAL FAGCYLVYAA VGTATAIMAV QLVLGVGLAL
YNLAVVEFAH RFSPDELTST GQAVLSAFGI GTGRALGQLG AGNVMDLVGV QSMYFVLSAL
AAAALLLSLG FHGPALRRVG NAAGVGRYSN N