Gene Hmuk_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1548 
Symbol 
ID8411069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1477875 
End bp1478789 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID645019874 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_003177370 
Protein GI257387597 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACAGC GGGCGCGTGA CCTCGCACAG ACCGCGTACG AACGTCTCCT CGAGCGCGAG 
CTCTCGGACG CACCCAGCCA CGTCGCCGTC ATCCAGGACG GCAATCGCCG GTACGCCCGC
GAACAGGGTG CCGACACCAC GGCGGGCTAC ACCGAAGGGG CGGAGACGAC GGAGGCACTC
CTGCACTGGT GTGACGAACT GGCTGTCGAC GAAGTGACGC TGTACACCTT CTCGACGGAG
AACTTCGATC GGCCCAAAGA GCAGCAGGAA CACCTCTTCG ACCTCATCGA ACGGAAGCTC
AGGGCGTTCG CCGATACCGA CCGCGTCCAC GATAACGAGG TCCGGATCCG GGCGATCGGC
GAAACTGAGC GGCTTCCCGA GCGCGTCCGC GATGCGATCG ACTACGCCGA GAGCCGGACT
GCCTGCTACG ACCGACTCCA GTTGAACGTC GCCCTGGCCT ACGGTGGCCG CGCGGAACTG
CTCGGCGCGA CCCGGGACAT CGCCCGGGCG GTCGACGACG GCGAACTCGA TCCCGAGTCG
GTCGACGCCG ACACCATCGA GGGGCGACTC TACGAGGGTC CGACCCGCGA CGTCGACCTG
ATCGTCCGGA CCGGCGGCGA CGAGCGGACC TCGAATTTCC TCCCCTGGCA CGCCAAGGGC
AACGAGGCTG CGGTCTACTT CTGTGCCCCC TACTGGCCCG AATTCCGGAA GATCGACTTC
CTGCGGGCGA TCCGGACCTA CGAGCACCGC GCCGAGTCTT GGCGTCGCAC GCGCGCTCGC
CGCGCGCTGA CGCTCGTCCG GGCTCTCGGC CCCGAGGCGT CACAGGCCCG GCGGATCCTC
GGTCGCTTCC GCGACGCGCT GACGCGCCAG GAACGGGAGG CCGTCGAAGA CGACGTCGAC
GTGGTCGCGG ACTGA
 
Protein sequence
MLQRARDLAQ TAYERLLERE LSDAPSHVAV IQDGNRRYAR EQGADTTAGY TEGAETTEAL 
LHWCDELAVD EVTLYTFSTE NFDRPKEQQE HLFDLIERKL RAFADTDRVH DNEVRIRAIG
ETERLPERVR DAIDYAESRT ACYDRLQLNV ALAYGGRAEL LGATRDIARA VDDGELDPES
VDADTIEGRL YEGPTRDVDL IVRTGGDERT SNFLPWHAKG NEAAVYFCAP YWPEFRKIDF
LRAIRTYEHR AESWRRTRAR RALTLVRALG PEASQARRIL GRFRDALTRQ EREAVEDDVD
VVAD