Gene Hmuk_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1500 
Symbol 
ID8411021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1427745 
End bp1428968 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID645019826 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003177322 
Protein GI257387549 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0717216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGT ACAACCGTCG GTCACTGCTC CGTGCGGGTG TCGTCGCCGG AACGGTCGCT 
ACTGCCGGCT GCCGTTCTCC GCGGCGTCCG GAGCGGACGA TCCGATCCGA TCGACGACCT
CCGGCGGGGA CGTGGCCGTC ACAGCACCGC GGCGTTCGAA ACAGTCGCCA CACTCCAACT
GCTGTGCCAC CGAGACAGAC ACCCGAACGC GAGTGGCGCG TCGACCTCCG GGGAACGGTG
TTTCGGATGG TCGCAACCGA CGCGACAGTG TACTGTCTGA CGCTGCGATC GGGTGGGTCG
GGTGACGTGT ACGCCGTTCG GACGGACGGT GTGATACGGT GGCACGAGGC GGATCTCGAC
GGTGTCGGAT CGCTCGACTA CGTCGCTGGG CGGCTGTACC TCGGCGGACG GACGTTCCGG
GCGCTGGAAG CGGACTCGGG CGGGGAGCTG TTCGAAACGA AGCTCCCGGA CGGACAAGCG
TACTCGGCCG TCGAGCACCG CGGCACGATC TACGTCGCGA CGAACACTGA CTCGTTCTAC
GGACTCGACG CGGACACGGG GGCGATCCAG TGGCACGCGT CGATCGGTGG CGACCACGGC
GTCAGCATCT ACCGGGGGCA GCCACTCGTC TCGTCGCCGT ACCGAATCCG CTGCTACCGG
TCCGACCGTT CGCCGTTGAC GGCCCTCCTC GGTGAGCCAC CGGCGATTCA CACGTCCTGG
CAGCCACCGC ATCAGAGCGT CGCCGTCCTG TGGCCTGCCG TCGTCGATGG AACGCTGTAC
CGGGGAGCCG TCGGCACGGA CCGATCGACC GTTCCGCTGA TAGCGTACGA TCTCGACGCC
GGCAGACGGC GGTGGCACCG AGAACTGGCC AGTTACGTCT ACACGCCGGC AGTCGATCCC
GACGCCGGCC GCGTATACAC GTTTGCCCGT CCAGCGGGCG CTCGAACGTC CCACGGCACC
GTGTACGCAC TCGACAGTGC CAGCGGCGCG ACAGCGTGGT CACAGCCCCT CGACTTTCGC
GCGGGCTGTC CCGTGATCGC CAACGAGACG GTGTACCTTT CGGGACCGGA TGACGACGGC
GGGCGCGTCG TCGCCCTCGA CAGCTCGACC GGAGCGGTGC GGTGGGAGGC CGGCGTCGGA
GACAGCCAGG TCAACCACGC GCTCCTCTCG GTCGGCGAGC GACTCTACGT CGGCGGCACT
GGAGAGATGG TTGCACTGGC GTAG
 
Protein sequence
MSQYNRRSLL RAGVVAGTVA TAGCRSPRRP ERTIRSDRRP PAGTWPSQHR GVRNSRHTPT 
AVPPRQTPER EWRVDLRGTV FRMVATDATV YCLTLRSGGS GDVYAVRTDG VIRWHEADLD
GVGSLDYVAG RLYLGGRTFR ALEADSGGEL FETKLPDGQA YSAVEHRGTI YVATNTDSFY
GLDADTGAIQ WHASIGGDHG VSIYRGQPLV SSPYRIRCYR SDRSPLTALL GEPPAIHTSW
QPPHQSVAVL WPAVVDGTLY RGAVGTDRST VPLIAYDLDA GRRRWHRELA SYVYTPAVDP
DAGRVYTFAR PAGARTSHGT VYALDSASGA TAWSQPLDFR AGCPVIANET VYLSGPDDDG
GRVVALDSST GAVRWEAGVG DSQVNHALLS VGERLYVGGT GEMVALA