Gene Hmuk_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1062 
Symbol 
ID8410581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1011200 
End bp1011886 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID645019398 
ProductKaiA binding 
Protein accessionYP_003176896 
Protein GI257387123 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.38736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.180687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTCG AGAGTGGTGT GCCGGGATTC GACGAGCTCG TGGAGGGTGG GTTGCTGGAG 
AACCGGCTCT ACGTGATCAG CGGTCCGCCC GGAAGCGGCA AGACGACGTT CAGCGCACAG
TTCATCACGC AGGGAGCCAA GCGGGGCGAG GACTGTCTCT ACGTGACGAT GCACGAGACC
AAAGAAGAGC TGATGCAGGA CATGGCCGGC TACGACTTCG GGTTCGACCG CGCGATGCAG
TCCGATGCGA TCCAGTTTCT CAACCTCGTC ACCGAGAGCG GCAAGCGGAC CATCACCCAG
TTCGGTTCCG AGGGCGGACT GACGAGCCGC CTCGTCGCCT TCATCGAGCA GAACAACGTC
GAACGGGTCG TCGTCGACTC GACGATGTTG CTCCAGCACT TTCTGACGGA CGTCTCCGAG
GAGATCACCG GCTTTCTCTC GGCGCTGAAA CAGACCGACG CGACCGTCTT GCTCATCTCC
GAGATGACCG ACCCCACGTC GTACTCCGAC GAGCACTACC TCGCCCACGG CGTCGTCTTC
TTCCACAACT TCCTCGATAG CGGGAGCATG ACCCGCGGGC TCCAGGTCAT CAAGATGCGG
GGCACCGCCA TCGACTGTGA CATCCGACGG ATCAGCTTCT CCGACACCGG ACTCCGGGTC
CACCCGAGCG AGAAAGTAGA ATCATGA
 
Protein sequence
MRLESGVPGF DELVEGGLLE NRLYVISGPP GSGKTTFSAQ FITQGAKRGE DCLYVTMHET 
KEELMQDMAG YDFGFDRAMQ SDAIQFLNLV TESGKRTITQ FGSEGGLTSR LVAFIEQNNV
ERVVVDSTML LQHFLTDVSE EITGFLSALK QTDATVLLIS EMTDPTSYSD EHYLAHGVVF
FHNFLDSGSM TRGLQVIKMR GTAIDCDIRR ISFSDTGLRV HPSEKVES