| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1002 |
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| Symbol | |
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| ID | 8410519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 956038 |
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| End bp | 956640 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645019337 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003176837 |
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| Protein GI | 257387064 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.873632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCTGG CCGTGTTCCT CGCGGTGTTT CTCTGTCAGG AACTCGTGTC GCTGGTCGCG
GGTGGCGTCG CGATGCAGTC GCTGTTCGTG CTGACGACGC CGGTGACCCA CAACCCGTGG
ACGGTCGTGA CGAGCGTCTA CGCCCACAGC GGCGTCTCGC ACCTGGTCGC GAACGCGGTC
GCGCTGGCGG TCGTCGGAAT CTTGCTGGAA CGCCAGACGA CGCCGGCCCG CTTTCACGCC
TTCTTCGTGG TCGCGGGGGC GCTCTCGGGG CTCGCCGAGG TGTGGCTCGC GCCGCTGGTG
GGTGCGGTGC TTGGCGGCGC GGGCCAGGTG AGCGTACTGG GCGGGAGCGG GGCAGTCTTC
GCACTGGCGG GGTACCTGCT GACCAGCAAC CGACTCACGG ATCGCGTCGT CGGTACGATT
CAGCTCAGCC CGCGACTGCA ACTGGCGGCC TTCGCGGCGA TCGCGGTCGT CGTCACGCTG
GCCACGGCCC GGCCACAGGT CGCGCTCGTC GCACACTTCA CCGGTCTGTT GCTGGGGCTG
GTGGCCGGCC GCGTCCACGT GTTGCGCCCG CGCCAGAAGG GAGCCCAGCC AGAGCCAGCG
TGA
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| Protein sequence | MTLAVFLAVF LCQELVSLVA GGVAMQSLFV LTTPVTHNPW TVVTSVYAHS GVSHLVANAV
ALAVVGILLE RQTTPARFHA FFVVAGALSG LAEVWLAPLV GAVLGGAGQV SVLGGSGAVF
ALAGYLLTSN RLTDRVVGTI QLSPRLQLAA FAAIAVVVTL ATARPQVALV AHFTGLLLGL
VAGRVHVLRP RQKGAQPEPA
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