Gene Hmuk_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0800 
Symbol 
ID8410314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp772961 
End bp775516 
Gene Length2556 bp 
Protein Length851 aa 
Translation table11 
GC content67% 
IMG OID645019135 
ProductHef nuclease 
Protein accessionYP_003176638 
Protein GI257386865 
COG category[L] Replication, recombination and repair 
COG ID[COG1111] ERCC4-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.48491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGT CCGACGCCGA TCCGGGGAGC ACCGACGGCC ACGTCGATCA CCCGCTGGTG 
ACGCCGGGAC TACTCGAACA GCGGCGCTAC CAGCGCGAGC TGGCCGATAC GGCGCTGGCC
GACCACACGC TGGTCTGTCT CCCGACCGGC CTGGGCAAGA CGACGGTCTC CTTGCTCGTG
ACCGCCGAAC GGATACAGGA CGCGCAGTGG AAGTCCCTCC TGCTCGCGCC GACGAAGCCG
CTCGTCCAGC AACACGCCGA GTTCTACCGG GAGGCCCTGC AGGTGCCCGA CGACGAGATC
GTCGTGTTCA CCGGCGAGGT CCGGCCAGCC AAGCGGTCGG ACCTCTGGGA AGACGCCCGC
GTCGTCATCG CGACGCCGCA GGTCGTCGAG AACGACCTCG TGGGCAACCG GATCTCCCTG
GCGAACGTGA CCCACTGTAC CTTCGACGAG TGTCACCGCG CGACCGGCGA CTACGCCTAC
AACTACATCG CCGAGCGCTA CCACGAGGAC GCATCGGATC CGCTCGTGAC GGCGATGTCG
GCCTCGCCGG GCGGCGACGA GGAGGAGATC CTGACGGTGT GTGAGAACCT CGGCCTGCGT
GAGGTGGCGG TGATGACCGA GGACGACGCC GACGTGGCCG AACACACCCA CGACACCGAA
CTCGAGTGGA AGCGCATCGA GTTGCCCGAG ACCGTCATCG AGATACGGGA CGCGATCAAC
GAGGTCGTCA GCGACCGGCT CGCACAGCTC AAAGAGCTGG GCGTCACCTC GACCACCCAG
CCCGACGTGT CCGAGCGCGA GATCCAGAAG ATCCAGGGGA AGCTGTCCGA GCTGATGGAC
AACGACCAGA GCGAGGGGTA CAGCGGGATG AGCCTGCTCG CCGAGGTCCG AAAGCTCCGC
ACGGCCGTCA CCTACGCCGA GACCCAGAGC GTCGAGGCGC TGCGTCGGTA CTTCGAGCGC
CAGAAGGAGG CCGCCCGCTC GTCGGGAGCC TCCAAGGCCG ACCAGCGACT CGTCTCGGAC
CCGACGGTGA TGGAGGCCAT GCGGAAAGCC GAGAACTTCA CCGACCTCCA CCCGAAGTTC
CGCCGGACCC GGATGTTGCT GGCCGAGACG CTGGGCATCG AGAACGGCGA GCGCGTCATC
GTCTTCACCG AGTCCAGAGA CACCGCCGAG ACGCTGACCG ACTTCCTCTC CGATCACTTC
GAGACCGAGA AGTTCGTCGG CCAGAGCGAC ACAGAGGGCA GCGAGGGGAT GACACAGACC
CAGCAACAGG AGACACTCGA CCGGTTCCGA GCCGGAGAGT TCGAGGTGCT GGTCTCGACC
AGCGTCGCCG AGGAGGGACT GGACGTGCCC GAAGTGGACC TCGTGTTGTT CTACGAGCCC
GTCCCGACGG CGATCCGCTC GATCCAGCGC AAAGGACGGA CCGGCCGCCA GACCGAGGGT
CGCGTCGTCG TCCTGCTGGC CGAGGACACC CGCGACGAGG CGTACTTCTG GAAGTCCCGA
CAGGACGAGC AGCGCATGGA GGACGAACTC CGCACGCTGA AGGGCGTCGC CGGCCAGCTA
GAGTCGAAAC TGGGGGGTGA GCAGACTGGC GTCGACGAGT ACGACGACGG CCAGACCGAC
CGAGAGCGCG GCGAAGAACC CGGAGGAGAC GGTCTCGACG GGGACGAAGG TACCACTTCG
AGTGGAAACG GCGGCGGTCC GTCCGACGCC GAGCGCCAGC CCTCGGAAGC GTCGAACACG
GGCGAACGAT CCGAAGCCGA CGGCCAGACG GCCGACGGTG ACGGACAGGC CGGTCTCGAC
GCCTTCGCCG ACGACGGCGC GACGGGAGCG GACGAAGATG AGACAGCCGG CGTTCCAGAC
GAAACGAAGG GGTCGACGCC GGAGCCACAC GCCGACGGCG ACGAAACCGT CGCGATCGTC
GCCGATCAGC GAGAACTCGA CTCGACGATC GCACGCGATC TCTCGACCCG CGAGGGCGTC
CAGACGGAAC TGGAGACGCT GGCGGTCGGG GACTACGTGC TCTCGGATCG GGTCGTGGTC
GAGCGCAAGA CCGTCAGCGA CTTCCTCGAT ACGCTGACCG GCGGCGACCG CTCGATGTTC
GAGCAGGTCG GCGACGCCAC CCGTCACTAC GCCCGCCCCG TCGTCGTGAT CGAAGGCGGC
GACCTCTACG GCGAACGCAA CGTCCACCAC AAGGCGATTC AGGGCGCACT GGCCTCACTC
TCGGTCGACT TCGGCGCGAG CGTCCTCCAG ACGGCCGACG AAGAGGAGAC CGCGGACCTG
CTGGAGACGA TCGCCCGGCG CGAACAGGAG GAGTCCGACC GCGAAGTCAG CGTCCACGGC
GAGAAGCAGG CCAAGACACT CGGGGAACAG CAGGAGTACG TCGTCGCGTC GGTGGCGGAG
GTCGGCCCCG TCACGGCGCG GGCGCTACTC GAACACTTCG GGAGCGTCGA GGCCGTTATG
ACCGCCGACG AAGACGAGCT GATGGACGTC GACGGCGTCG GCGAGGTGAC GGCCGAGCGG
TTTCGGGACG TGGTCGGCAG CGAGTTCGAG CAGTGA
 
Protein sequence
MAQSDADPGS TDGHVDHPLV TPGLLEQRRY QRELADTALA DHTLVCLPTG LGKTTVSLLV 
TAERIQDAQW KSLLLAPTKP LVQQHAEFYR EALQVPDDEI VVFTGEVRPA KRSDLWEDAR
VVIATPQVVE NDLVGNRISL ANVTHCTFDE CHRATGDYAY NYIAERYHED ASDPLVTAMS
ASPGGDEEEI LTVCENLGLR EVAVMTEDDA DVAEHTHDTE LEWKRIELPE TVIEIRDAIN
EVVSDRLAQL KELGVTSTTQ PDVSEREIQK IQGKLSELMD NDQSEGYSGM SLLAEVRKLR
TAVTYAETQS VEALRRYFER QKEAARSSGA SKADQRLVSD PTVMEAMRKA ENFTDLHPKF
RRTRMLLAET LGIENGERVI VFTESRDTAE TLTDFLSDHF ETEKFVGQSD TEGSEGMTQT
QQQETLDRFR AGEFEVLVST SVAEEGLDVP EVDLVLFYEP VPTAIRSIQR KGRTGRQTEG
RVVVLLAEDT RDEAYFWKSR QDEQRMEDEL RTLKGVAGQL ESKLGGEQTG VDEYDDGQTD
RERGEEPGGD GLDGDEGTTS SGNGGGPSDA ERQPSEASNT GERSEADGQT ADGDGQAGLD
AFADDGATGA DEDETAGVPD ETKGSTPEPH ADGDETVAIV ADQRELDSTI ARDLSTREGV
QTELETLAVG DYVLSDRVVV ERKTVSDFLD TLTGGDRSMF EQVGDATRHY ARPVVVIEGG
DLYGERNVHH KAIQGALASL SVDFGASVLQ TADEEETADL LETIARREQE ESDREVSVHG
EKQAKTLGEQ QEYVVASVAE VGPVTARALL EHFGSVEAVM TADEDELMDV DGVGEVTAER
FRDVVGSEFE Q