Gene Hmuk_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0612 
Symbol 
ID8410118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp569377 
End bp570546 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content72% 
IMG OID645018940 
Productbeta-lactamase domain protein 
Protein accessionYP_003176451 
Protein GI257386678 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.380444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT CCTATCCCGA CCCGCCGGTC GAGCCGGCGA CGATCACCCC GGAGACGCTG 
GCCGGACGGC TGGCCGACGG TGAGAGGGTT CGGTTGCTCG ACGTGCGCGA CCGCGACGAG
TACGAGCGAT GGCACATCGC CGGGCCGTCG GTGACGGCGA CACAGCACTC GTTCGCAAAG
GCCCTGCAGG CACAGGTCCG AGGGTCGGTC GACGAGCTGG CCGCACAGGT CGCGGGCGAG
GGGCCGATCA CGGTCGTCTG TGCCCGGGGG GAGGCGAGTG CCTACGTCGC CGGACTGCTG
ACGGAGGCCG GCGTCGACGC GCACAACCTC GCGGGCGGGA TGGACGGCTG GGCCCGCGTG
TACGAGGCAC ACGAACTCGA CGCGGACGAG GCGACGATCG TCCAGTACCA GCGACCGGCC
TCGGGCTGTC TGGGCTATCA GATCGTCGCG GACGGCGTGG CGGCCGTCGT CGATCCGCTG
CGCGCGTTCG CAGATCGGTA CGCCGCGGAC GCGACGCGAT TAGACGCGAC GATCGAGTAC
GTGATCGACA CTCACGTCCA CGCCGACCAC GTCAGCGGCC TGCGGTCGGT CGCGGCGGCG
ACTGGCGGCG AGGCGCTGGT GCCGGCGCGG GCTCACGAGC GCGGCGTCGT CGGGACCGTC
GGGACGCTGG CCGACGGCGA GACGCGCAGC CTGGGGGAGA CGACGCTCCG GGCGGTCGCG
CTGCCGGGTC ACACGACGGG GATGACCGGC GTCGCGGTCG GCGACGTGCT GCTGACCGGC
GACAGCCTCT TTCTGGAGAG CGTCGCCCGC CCGGACCTCG AAGCGAGCGA CGACGCGGCG
GCGTTCGCCC GAGAACTGTA CGCGACGCTG ACCGAACGGC TGGACGCGTT CGACGACGAG
ACCCTGATCG CGCCGGGCCA CGTCGGCGAG CGAACGGTGC GAAACGACGA CGGCAGCTAC
GCGGCGACGC TGGGCCAGCT CCGAGAACGG CTGTGGGCCT TCGCGGTCGA CGAGGCGACG
TTCGTCGAGC GCGTCACGGA GAACGTCCCG CCGCGCCCGG CCAACGCCGA GGCGATCGTC
GCAGCCAACC TCGGCCGACG GACGCCGAGC GACGACGACG CCTTCGAGTG GGAACTGGGA
CCGAACAACT GCGCCGCGAC GGCGGAGTGA
 
Protein sequence
MSESYPDPPV EPATITPETL AGRLADGERV RLLDVRDRDE YERWHIAGPS VTATQHSFAK 
ALQAQVRGSV DELAAQVAGE GPITVVCARG EASAYVAGLL TEAGVDAHNL AGGMDGWARV
YEAHELDADE ATIVQYQRPA SGCLGYQIVA DGVAAVVDPL RAFADRYAAD ATRLDATIEY
VIDTHVHADH VSGLRSVAAA TGGEALVPAR AHERGVVGTV GTLADGETRS LGETTLRAVA
LPGHTTGMTG VAVGDVLLTG DSLFLESVAR PDLEASDDAA AFARELYATL TERLDAFDDE
TLIAPGHVGE RTVRNDDGSY AATLGQLRER LWAFAVDEAT FVERVTENVP PRPANAEAIV
AANLGRRTPS DDDAFEWELG PNNCAATAE