Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0350 |
Symbol | |
ID | 8409848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 341425 |
End bp | 342144 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645018675 |
Product | ABC transporter related |
Protein accession | YP_003176194 |
Protein GI | 257386421 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.285499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG ACGTTGCGCT CACGGCGACG GACCTCCGTC GAAGCTACGG TGACGTGACC GCTCTCGACG GCGTGTCAAT CGACGTGCCC ACCGACGGCG TGACGGCGCT GATCGGCCCG AACGGCTCCG GGAAGACGAC GCTGCTGGAT GTGTTGCTGG GGATCGAACG GTCCGACGCG GGCACCGTCG ACTACGGCGA GTCCGACGCC CGCCGACAGG TGGGCTATCT CCCGCAGCGT CCGACGTTCC GGCCCGACGA CACGGTCAGG GAGACGATCG CGTTCTACGC CGCGCTGGTC GAGGACGACC CGGACCGGCT GCTCGAACGC GTCGGGCTCG ACACCGTCCC GGACCGGCGC GTCTCGGCGC TCTCTGGCGG CATGACGCGA CTGCTCGGGA TCGCACAGGC ACTCGCTGGC GATCCGCCGA TCCTCGCGCT GGACGAACCC GCGAGCGGAC TCGACCCGGC GATGAGCGAT CGGATCTTCG GGGTGATCGA CTCGCTGGCG GCGGACGGGC GGGCCGTGTT GCTCACCTCG CACGCGCTCT CGCTGGTCGA GCGGACGGCG GACCACGTTG TCGTCGTCGA GGCCGGTGGC GTCGCGGCGA GGGGCTCGCC GGCCGCGCTG CGCGAGCGGA CGGGTGGCCC GCTCCACGAG ACGTTTACCG ATCTGCTGTC GGAGCCGACG ACTGCGGTCG ACGGGGGTGA CGAGTCGTGA
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Protein sequence | MTDDVALTAT DLRRSYGDVT ALDGVSIDVP TDGVTALIGP NGSGKTTLLD VLLGIERSDA GTVDYGESDA RRQVGYLPQR PTFRPDDTVR ETIAFYAALV EDDPDRLLER VGLDTVPDRR VSALSGGMTR LLGIAQALAG DPPILALDEP ASGLDPAMSD RIFGVIDSLA ADGRAVLLTS HALSLVERTA DHVVVVEAGG VAARGSPAAL RERTGGPLHE TFTDLLSEPT TAVDGGDES
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