Gene Hmuk_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0350 
Symbol 
ID8409848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp341425 
End bp342144 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID645018675 
ProductABC transporter related 
Protein accessionYP_003176194 
Protein GI257386421 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.285499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG ACGTTGCGCT CACGGCGACG GACCTCCGTC GAAGCTACGG TGACGTGACC 
GCTCTCGACG GCGTGTCAAT CGACGTGCCC ACCGACGGCG TGACGGCGCT GATCGGCCCG
AACGGCTCCG GGAAGACGAC GCTGCTGGAT GTGTTGCTGG GGATCGAACG GTCCGACGCG
GGCACCGTCG ACTACGGCGA GTCCGACGCC CGCCGACAGG TGGGCTATCT CCCGCAGCGT
CCGACGTTCC GGCCCGACGA CACGGTCAGG GAGACGATCG CGTTCTACGC CGCGCTGGTC
GAGGACGACC CGGACCGGCT GCTCGAACGC GTCGGGCTCG ACACCGTCCC GGACCGGCGC
GTCTCGGCGC TCTCTGGCGG CATGACGCGA CTGCTCGGGA TCGCACAGGC ACTCGCTGGC
GATCCGCCGA TCCTCGCGCT GGACGAACCC GCGAGCGGAC TCGACCCGGC GATGAGCGAT
CGGATCTTCG GGGTGATCGA CTCGCTGGCG GCGGACGGGC GGGCCGTGTT GCTCACCTCG
CACGCGCTCT CGCTGGTCGA GCGGACGGCG GACCACGTTG TCGTCGTCGA GGCCGGTGGC
GTCGCGGCGA GGGGCTCGCC GGCCGCGCTG CGCGAGCGGA CGGGTGGCCC GCTCCACGAG
ACGTTTACCG ATCTGCTGTC GGAGCCGACG ACTGCGGTCG ACGGGGGTGA CGAGTCGTGA
 
Protein sequence
MTDDVALTAT DLRRSYGDVT ALDGVSIDVP TDGVTALIGP NGSGKTTLLD VLLGIERSDA 
GTVDYGESDA RRQVGYLPQR PTFRPDDTVR ETIAFYAALV EDDPDRLLER VGLDTVPDRR
VSALSGGMTR LLGIAQALAG DPPILALDEP ASGLDPAMSD RIFGVIDSLA ADGRAVLLTS
HALSLVERTA DHVVVVEAGG VAARGSPAAL RERTGGPLHE TFTDLLSEPT TAVDGGDES