Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0290 |
Symbol | |
ID | 8409788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 285293 |
End bp | 286555 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645018615 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003176134 |
Protein GI | 257386361 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.338306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGACA ACGACCGCTC GATCGTCGGC TTCGCGATGC TGGCCCACGC GACGGTCCAC ACCTACGAGC TGTCGATCCC CATCTTCGTC GTCGTCTGGC TCCAGCAGTT CTCGACGACG ACAGCGCTGC TCGGGACGAT CGTCGCCGTC GGCTACGCCC TCTTTGGCAT CGGCGCACTT CCGGGGGGCG TGCTCGCCGA CCTCCTGAGC GCTCGGACCG TCGTGATCGG CTGTCTGCTC GGGATGGGCG GCTCGTTCCT CTTGCTCGGG TTCGCACCGG GCATCCCGAC GATCGCCCTC GCGCTGGGGC TGTGGGGCGT CGCCGCCAGC GTCTACCACC CGGCCGGCCT CTCCTTGCTC TCGACGGGCG TGTCAGAGCG CGGCACCGGC TTCGCTTACC ACGGGATGGC CGGCAACGTC GGCATCGCGT TCGGACCGCT GGCGACCGCG CTGCTCTTGC TGGCCTTCGA CTGGCGAACC GTCGCGGGCC TGCTCTCGAT CCCCGCCGCG CTGGCGGTCG CGTACGCAGT CACCGCCGAG TTCGACGAGA TGGCCGCCGT CCGCGCTGAC GGCGGCGCGG ACGAGGGCCG TGGCGGCGGA CCGTCCTCGC TCGGCGAGTT CGTCACCGGC ACGCGGACGC TCTTTACGGC GGGCTTCGCG CTGGCGATCT GCGTCGTGCT GATGAACGGC GTGTTCTACC GCGGCGTCCT CACCTTCCTG CCGGACGTGC TCGGTGGCTT TCTCCCGCCG ATCACCGACT ACGTCCGCCT CTTCGATCCC GGCAGTCCGA TGGCCGAGGA GTTCGATCTC GCCTCCTACG TCTACGCCGG CCTGCTGACG GTCGGCATCG CCGGCCAGTA CGCTGGCGGC AAGCTCACCG ACCGGATCTC GGTGACGACG GGGCTGATCG GGGTGTTCGC TGCGCTCGCC GTCGTCGCGG TGTTGTTCGT GCCGGCCGCC CAGGCCGGTC TGGGTCCGCT GCTCGCTGTC AGCGCGGTGC TTGGCTTCGT GCTCTTCGCC ATCCAGCCGC TCTATCAGGC GACCATCGCG GAGTACAGCC CGCCAGACGA CCGCGGACTC TCGTATGGGT TCACCTACCT GGCGAACTTC GGCGTCGGCG CGGCCGGCGC GGCGCTGTCC GGCATCCTGC TGTCGGCGGT CGGCACCGAC GGCACCTTCC TCGCGCTGGC GGCCTTCCCG GTACTCGGCG CGGCACTGGC CGTGGCGCTG TCACGGGTGG GCACTCGGCG AGGGGCGGCC TGA
|
Protein sequence | MNDNDRSIVG FAMLAHATVH TYELSIPIFV VVWLQQFSTT TALLGTIVAV GYALFGIGAL PGGVLADLLS ARTVVIGCLL GMGGSFLLLG FAPGIPTIAL ALGLWGVAAS VYHPAGLSLL STGVSERGTG FAYHGMAGNV GIAFGPLATA LLLLAFDWRT VAGLLSIPAA LAVAYAVTAE FDEMAAVRAD GGADEGRGGG PSSLGEFVTG TRTLFTAGFA LAICVVLMNG VFYRGVLTFL PDVLGGFLPP ITDYVRLFDP GSPMAEEFDL ASYVYAGLLT VGIAGQYAGG KLTDRISVTT GLIGVFAALA VVAVLFVPAA QAGLGPLLAV SAVLGFVLFA IQPLYQATIA EYSPPDDRGL SYGFTYLANF GVGAAGAALS GILLSAVGTD GTFLALAAFP VLGAALAVAL SRVGTRRGAA
|
| |