Gene Hlac_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3311 
Symbol 
ID7402170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand- 
Start bp51864 
End bp52448 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content47% 
IMG OID643709866 
ProductProtein of unknown function DUF1628 
Protein accessionYP_002567432 
Protein GI222481196 
COG category 
COG ID 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA ACCGGGGAGT CACACCAGTT GTCGGTGTGA TCTTGATCGT TGCAATCACA 
ATTCTTCTCG CGTCGGTCAT CGGTGTGTAC ACAGTGGGAA TCACGGACGA CGTGAGCGAG 
AGGCCTACTT ATTCTGCCCT AGAATTGGAT TTTGAGGAGG AACCCGCTTC ACAACCCGAC 
TACAAGAAGT TCCGCTGGCA GATTGAGCTT ACACATACAG GCGGTGAAAC CGTAGATGCC 
GATGACATCA TTGTTCATCT TGACCACGGA GATCAGAGGG TCACTGGAAA CCTCAATAAG 
TCGTTAACCG CCGGTGAGAC CGTTGAGTTA GTAGTGGTTC ACAACAACCA AGATAGCAAT 
ACGATTCCAG ATGATCTAGA CTGTGGTGAG GTCAATGTGG CATGTCGACT GGCTGGTAAC 
GAAGGGAATT TTCCAGACGA CGATCAAATC CAACTCCGAA TGATACACGA ACCATCGAAT 
ACGATACTCT ATGAGGAAAT GATAGGCATT TCAGGGAACT ATGGAATATT CAATGGTGAC 
CCGAGCGATA TCGATATAAC AAATGAAACA CTGACATTCG CGTGA
 
Protein sequence
MKNNRGVTPV VGVILIVAIT ILLASVIGVY TVGITDDVSE RPTYSALELD FEEEPASQPD 
YKKFRWQIEL THTGGETVDA DDIIVHLDHG DQRVTGNLNK SLTAGETVEL VVVHNNQDSN 
TIPDDLDCGE VNVACRLAGN EGNFPDDDQI QLRMIHEPSN TILYEEMIGI SGNYGIFNGD 
PSDIDITNET LTFA