Gene Hlac_3287 details

Gene Information

• Locus tag: Hlac_3287
• ID: 7402433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorubrum lacusprofundi ATCC 49239
• Kingdom: Archaea
• Replicon accession: NC_012030
• Strand: +
• Start bp: 28367
• End bp: 28912
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643709844
• Product: transcription factor
• Protein accession: YP_002567410
• Protein GI: 222481174
• COG category: [K] Transcription
• COG ID: [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGTCG AAATTGCGAA CATCGTCGGC TCCGGCGATC TTGGCGTGGA GCTGGATCTC 
GAAGCATTGG AAGGCGACTT GTCTACACCG TACTTGGAGT ACGACCCGTC GAATTACCAC 
GGTCTTTACG TTCGTCTCGA AGAAGGTGGG CCGCTCATCA CAGTCTATCG GAGCGGGAAG 
TACATCATCA GCGGCTGCCC CAGTGAGGAG GTACTACGCA AGACGAACGA TGGATTCCTG 
AGAGCCCTCG CAGAGTTGGG AATCACCGAC GAAGCTCAAC AGACCGGGTT CACTGTCCAG 
AACGTGGTCT GTACTGCGAT GCTCAATGAG ATGGTTTCTC TGAATGCTCT CTCAATCGGG 
TTGGGGTTGG AAGTAACGGA GTATGAGCCG GAGCAGTTCC CGGGTCTGGT TTATCGGCCC 
GAGGGCATCG GTGCTGTACT ACTAGTGTTC GCTAACGGGA AGCTGGTGAT TACAGGTGCG 
AAGGATGCCG AGACCGCCGA AGTAGCGTAC AATCACCTTC AGTCGAAGGT ACAGGAACTA 
GTGTAG 

 

Protein sequence

MTVEIANIVG SGDLGVELDL EALEGDLSTP YLEYDPSNYH GLYVRLEEGG PLITVYRSGK 
YIISGCPSEE VLRKTNDGFL RALAELGITD EAQQTGFTVQ NVVCTAMLNE MVSLNALSIG 
LGLEVTEYEP EQFPGLVYRP EGIGAVLLVF ANGKLVITGA KDAETAEVAY NHLQSKVQEL 
V