| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3176 |
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| Symbol | |
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| ID | 7399305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012028 |
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| Strand | - |
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| Start bp | 409007 |
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| End bp | 412264 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643706976 |
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| Product | conjugation protein |
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| Protein accession | YP_002564598 |
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| Protein GI | 222476077 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAA ACACTGACGA CCAGGAGTAC AGCGCCCGAC GCATCCATCA GTCACTCGGC
GGCACGACCG CCTTCTTCCA GGGGTACACG ATTGGCGAGA TCATGCTGTT CGTCGGCGTG
GCGTTCGTCA CGCTCATCGG CGCAGCACTG GTTCCAGCCA CCTTCACGAT TCCTGTCCTC
GGGTTCGGCC TCATGCTCGG GCTCGTCCTC GGCGTCCTCC ACAAGGTCAA ACCGTCCTAC
CTATGGCTTA CCGAGTGGTT GGCTGCACGG CTCGGCTGGG CAGTCAAGAA CAAGGAGTAC
ACCCACGGCG AAGACAACAG CGAGGTCCGC TACCTAACCC GTGTTGGTCA GGTCTTCCCG
CACGCCATCG AGCGGTCAGA CGGCGCGCTT GTTGGGGCGA TGAAAGTCGA GCCAGCGAAC
ATGGCCCTCG AAGACGACGA CGCGTGGGCG AAAGCCGTGG ATTCACTCTC CGAGTTCGTC
AACGCGACCA TCGATTTCCC GGTGAAGTTC TACATCACCA GCCGCGAGGT CGACCAGGAC
GACGTTGTCC GCGACCACCA GCGGCGTCTC GGCGACGCCG ACGTCAGATC ACGGCCCGTC
CTCAAGCGCC TGCTCGACGA GTACATTACG ACCAACACGG ATCAGAACGG CGACATCGAC
TCCGAGGCTA CGACCATCCG CGAATACTAC ATCATCACCG CCGTTCGTGA CGCTGACGTC
GAGCAACTCA ACGAAACCGG CGATAGCGTC CTGGCCTACC TCGCCGACAT CCCTGTCCTG
GGTCGTGTGT TTGGGCGGTT CCAATCAGAC GGCCTCTCGG ACGCCGAACG CGACCGCCTC
AAAGAAGACA AGCTGGAATC ACGGCTGGGA CAGCTCCGCC GCGGTGGGTC GTCGCTCTAT
CGCTGCTCGA TGAGCCCAGT CGACGCTTAC GACCTCACCC GCGTGACGAA GGAATACTGG
ACGGGACACA CCGAAGAGTA CGGCGAGATC ACTGACGCAA TCGGCACGTT CCCGGTCGTC
GCCCACGGCA TCAGCGACGA CGTACCGACA ACCCCCGACC CGGACGACGT CGTCGACGCG
ATGGACGACA GCGGTGAAGA GACAGGTTCA GACGACACGG CCGATGTGTC CGCTGCAGAT
CGGCTCGACG ATACGTCGAC GCTCCACCAG TCGGTGATCG CACCGTCGAC GGTCGATTGG
GAGGCGACCC ATGCCGTCAT CAACGACGAC ACGTACGTCC GGACGTTCTG GATCGAGCAG
TTCCCCGAAG AGCCAGCTGA CGGGATATTC GAGCGCCTCC TGCTAGAGAC CGACCTAAAC
ACGGACATCA GCATCCATCT CGACCCCTTC GACAGTCAAT CGGCCGAAGA CATGATGGCC
GACTGGATTT CGGATCTGAA GGTCAATCAG CACGACTCGA ACAGCCTGAA AGCCGAGGAC
CTCCAGAAAG ATATCGACCG TGGGAAGTTC ATGCGGTCGC TCGTCCGCGC GAACAAGGCG
TCGTTCTACC GTGGCGGCGT CTTCATCCGC CTCTCTGCCG AGAGCAAGCA GGAACTCGAT
ACCCAGACGA CGCGTCTCCG CTCCATCGTC AAGGACGCCC CAGCGAACTG CACACTGAAG
GTCGCAAATC GCTGGCAGGA GAAGGGGTTG GCGACTGTCT CACCGCTCGG CGCGAACGAA
CTCGGTCGCG ACCGAATGTC GACGCTGACG AATCAAGCGG TGGGTGCGAT GTTCCCCTTC
AGTTCGAACT ACATGATGAT GGACGAGGGC GTCGAATACG GCTACCATGG CCACAACGGC
TCACCCGTCC AGATCAACCC GTGGGACCTC GAAACCGGCC ACAGCGAACT CGTCGTCGGG
ATGCCCGGCG CCGGGAAGAC GTTCGGCGAC ATCATGCGCC ACCTCCGGAT GATGAAACGC
CAGCAGGACA CGATGCTCGT GATGATCGAT CCGGTCGGCG GATTCAAAGG CATCGCCGAC
GCGCTGAACG CGAAGACGAT CTCCGTGGGT GGCGACACAC AGCTGAATCC GCTGGAGATC
CGTGAAACGC CGCAGGAAGT CCTCGACGCC GATGATGGCA TCTCGCCGCT GTCGGCGAAG
AAAGACGAAG TGTACGCCGT TCTGGAGAAT TTCCTGACCG CTCGCGACAT CGACCTCGGG
ACCGAAACGG GCGTTCTTTC CTACGTTATC GACGAGACGT ACCGCCAGGC AGGCGTCGTC
GAGGACGACG TCACGACGCA CACCCCAGAA AACTCGCCGA CGATGACCGA CATCCATCGG
ATTCTCGCCG ATATCGCGGA GAACCCCGAC GAGCACAACA TCGCCGCGTC CGAATCCGCT
CGCGAACGCG CCGCAGCGTA CGCCGATGAA CTCGCAATTG CGTTCCAGCC GTTCCGTGAG
GGTGGGTCGT ACGACAACCT CGCGGAGCGC TCGGAGGTCG ACATCCTCGA GGGCGATAAC
AAAGTCGTCT ACATCGACCT CGGACAGATC GAAGGCAGTG CGTCAGGGAT CGACCGCCAG
ACGTTCCTGA TGCAACTGCT CCTCTCGACG GTCTACCAGC AGGCGAAGAA GACCGACCGG
AACGTCGAAC TCGCCATCGA CGAGGCGCAC TATCTCTTCG AGGACCAGGC GAATCTCGAT
TTCCTCGAAA CGGCGTTTCG CCACCAGCGC CACGCTGGCC TCCGGATGGT CTTGCTCTCC
CAGACGGCCC AAGAGTTCTA CGAGACCGAC CAGGCTGAGA AGATTCTCGG GATGTGCCCG
ATCAAGGTCT TCCACAAACT GCCGGACCTG GACGACGAGA CGGCCGACAA GATCGGACTG
ACGCGCGAGC AGCGACAGTA CGTCCGTGGT GCCGACGCTG GGAAGGAGGA CCTCGGCTAC
AGTCAGGCAC TCGTCCGTGT CGAAGAACAC GGGACCTACC CACTGCACAT CGTTGCGGAT
CCGTTCGAGA AGCGCGTCAT TGACTACGAA CCAGCAGATC AGGAGTTCAT CCAGCAGGCC
ATCAGCGAGC AGTCTGAGGA ATTGGTCGAC TTCGACGCGT TCGTGGAGAA CGAAGCGCAG
ATGAACGCGC TGACCAGCCG CTACGACCTC TGCGAGCAAG AAGCCACGCG ACTGCTTGAC
GGAGAACTCT CCGAGGCGGA GATCGTCGAC GCAGTTGTTG CGAACGCACA GCGAAACGGC
ACGGCGGAGT CGTCTGCGCT CGCTGACAGC GGCGAGGACG CACGCCAGTC CGACGACGAG
GTGAGCGACG ATGCTTGA
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| Protein sequence | MSTNTDDQEY SARRIHQSLG GTTAFFQGYT IGEIMLFVGV AFVTLIGAAL VPATFTIPVL
GFGLMLGLVL GVLHKVKPSY LWLTEWLAAR LGWAVKNKEY THGEDNSEVR YLTRVGQVFP
HAIERSDGAL VGAMKVEPAN MALEDDDAWA KAVDSLSEFV NATIDFPVKF YITSREVDQD
DVVRDHQRRL GDADVRSRPV LKRLLDEYIT TNTDQNGDID SEATTIREYY IITAVRDADV
EQLNETGDSV LAYLADIPVL GRVFGRFQSD GLSDAERDRL KEDKLESRLG QLRRGGSSLY
RCSMSPVDAY DLTRVTKEYW TGHTEEYGEI TDAIGTFPVV AHGISDDVPT TPDPDDVVDA
MDDSGEETGS DDTADVSAAD RLDDTSTLHQ SVIAPSTVDW EATHAVINDD TYVRTFWIEQ
FPEEPADGIF ERLLLETDLN TDISIHLDPF DSQSAEDMMA DWISDLKVNQ HDSNSLKAED
LQKDIDRGKF MRSLVRANKA SFYRGGVFIR LSAESKQELD TQTTRLRSIV KDAPANCTLK
VANRWQEKGL ATVSPLGANE LGRDRMSTLT NQAVGAMFPF SSNYMMMDEG VEYGYHGHNG
SPVQINPWDL ETGHSELVVG MPGAGKTFGD IMRHLRMMKR QQDTMLVMID PVGGFKGIAD
ALNAKTISVG GDTQLNPLEI RETPQEVLDA DDGISPLSAK KDEVYAVLEN FLTARDIDLG
TETGVLSYVI DETYRQAGVV EDDVTTHTPE NSPTMTDIHR ILADIAENPD EHNIAASESA
RERAAAYADE LAIAFQPFRE GGSYDNLAER SEVDILEGDN KVVYIDLGQI EGSASGIDRQ
TFLMQLLLST VYQQAKKTDR NVELAIDEAH YLFEDQANLD FLETAFRHQR HAGLRMVLLS
QTAQEFYETD QAEKILGMCP IKVFHKLPDL DDETADKIGL TREQRQYVRG ADAGKEDLGY
SQALVRVEEH GTYPLHIVAD PFEKRVIDYE PADQEFIQQA ISEQSEELVD FDAFVENEAQ
MNALTSRYDL CEQEATRLLD GELSEAEIVD AVVANAQRNG TAESSALADS GEDARQSDDE
VSDDA
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