Gene Hlac_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3102 
Symbol 
ID7398898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp351934 
End bp352368 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content55% 
IMG OID643706905 
Productdeoxyribonuclease/rho motif-related TRAM 
Protein accessionYP_002564527 
Protein GI222476006 
COG category[R] General function prediction only 
COG ID[COG3269] Predicted RNA-binding protein, contains TRAM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAAA TCTCAGACTC CCTGTGTTCG CTGTTCACTG CGAAAATTAA GGAGGAGGAT 
GGCACATTCG TCATCGAGAT TCCTTCGAGT GAGATCAAGC ACGGGGCGCT GACTGGTGAT
GAGATGTACC GCATCGCTCT TCTTGATTCA TCCTCCGAAG CTGAATCAAC ATCTCCACAG
GCCCCACGGC ATCCCGCCTC TCAGGGGAGC ACGAGCCACG ATTCATCTGG TCCTCCTGTT
GATGAGGGAG AAGTGCGCGA CGTGACAATC GAAACCGTCG GTGATCAGGG CGACGGTATT
GCGAAAGTCG AACGTGGGTA CGTCGTGATC GTTCCTGGCG CTCACCCCGG CGACGAACCA
ACAGTCGAAA TCGAACAAGT TCAGGAGAAC GTCGCGTTTG CGAGCATCGC CGATAGCGAT
CCGCGAGCAC TCTAA
 
Protein sequence
MVEISDSLCS LFTAKIKEED GTFVIEIPSS EIKHGALTGD EMYRIALLDS SSEAESTSPQ 
APRHPASQGS TSHDSSGPPV DEGEVRDVTI ETVGDQGDGI AKVERGYVVI VPGAHPGDEP
TVEIEQVQEN VAFASIADSD PRAL