Gene Hlac_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2865 
Symbol 
ID7399101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp124378 
End bp125499 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content62% 
IMG OID643706685 
ProductABC transporter related 
Protein accessionYP_002564311 
Protein GI222475790 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGAA TCAATATCAC TGAACTAGAC AAGGTGTACG ACTCTGGAAC CGAGAACGTG 
GTCGCGGTGG AGAATCTCTC CGTCGAGATC AACCACGGCG AGTTCCTCGT GTTAGTCGGA
CCGTCCGGCT GCGGGAAATC GACAACGCTC CGCTGTCTCG CCGGTCTCGA GGACGTGACG
GATGGCTCGA TACGGTTTGG CGACAACGAT GTCACGGATC ATCGTGCCAG CGAGCGAGAC
GTGGCGATGG TGTTCCAGAA CTACGCGCTG TACCCGCACA TGACCGTCCG GGGAAACATC
GGCTTCGGGC TGAAGCTCTC GACGAAGCTG ACCGGCGACG AGATTGAACA AAAAGTTGAG
AGCGTCGCCG AGATGCTCGG CATCAGCAAG CTACTCGACG AGAAGCCGAA GGCGCTCTCA
GGCGGGCAAC AGCAGCGCGT GGCGCTCGGA CGGGCGATCG TTCGAGAGCC GTCCGTGTTT
CTGATGGACG AGCCGCTCAG TAACCTCGAC GCGAAGCTTC GATCGGACAT GCGGACCGAG
CTGCAGGAAC TGCAGGCCGA CCTCGACGTC ACGACGGTCT ACGTCACCCA CGACCAGACC
GAGGCGATGG CAATGGGCGA CCGGATCGCT GTGATGGACG GCGGGGTGCT CCAGCAGGTC
GGGCCCCCGG AAGAGGTGTA CCGTTCGCCG GTGAACCAGT TCGTCGCGGA CTTCATCGGT
TCGCCGAGCA TCAACCTCCT CTCGGCCGAC GTCGAGGGCG AGACCCTCCG GGGCCCCGGC
GGGTTTACGT ACGAACTCGA CGACCCGGAA CCGATCGCAG GCCACGACCG CGTCCGCGTT
GGCGTCCGCC CGGAGGACAT CACTGTCGTC GATTCAGGCC AGAACACGGC CGATGTGACG
GTCGTAGAGC CGATGGGGAA CGAGAACTTC CTCTACATGG AGATGGACGG CCACGAACTC
ACCGCCCGCG TCGATCCCTC GATCCGGCCG GCAGAGGAGA CACAGGTCTC CTTCGACTTC
CGCGAAGCGG CCCTCTACTT GTTTGACGCT CAAACTGGAG ACGCACTCAA GACCAAGACG
GACAACGTTG ACCCCGCGGT CGTCGGGGCG ACTGAAGACT AA
 
Protein sequence
MSGINITELD KVYDSGTENV VAVENLSVEI NHGEFLVLVG PSGCGKSTTL RCLAGLEDVT 
DGSIRFGDND VTDHRASERD VAMVFQNYAL YPHMTVRGNI GFGLKLSTKL TGDEIEQKVE
SVAEMLGISK LLDEKPKALS GGQQQRVALG RAIVREPSVF LMDEPLSNLD AKLRSDMRTE
LQELQADLDV TTVYVTHDQT EAMAMGDRIA VMDGGVLQQV GPPEEVYRSP VNQFVADFIG
SPSINLLSAD VEGETLRGPG GFTYELDDPE PIAGHDRVRV GVRPEDITVV DSGQNTADVT
VVEPMGNENF LYMEMDGHEL TARVDPSIRP AEETQVSFDF REAALYLFDA QTGDALKTKT
DNVDPAVVGA TED