| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2725 |
|---|
| Symbol | uvrC |
|---|
| ID | 7401336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2715469 |
|---|
| End bp | 2717247 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643709800 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_002567366 |
|---|
| Protein GI | 222481129 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCG ACGCCGTGCG CGAGCGGGCC GCAGACCTCC CGACTGAACC CGGTGTGTAC
CAGTTCCGGG CCGGGGAGAC GACGCTGTAC GTCGGCAAGG CGGTCAACCT CCGGAATCGG
GTGCGGTCGT ACGCCGACCC GCGCTCGGGG CGGATACGGG GGATGGTCGG GCGCGCCGAC
CGGATCGAGT TCGCGGTCAC CGACACCGAG ACGCAGGCGC TCCTGTTGGA GGCGAACCTG
ATAAAGCGGC TCCGGCCGCG GTACAACGTC CGGCTGAAAG ACGACAAGTC GTACCCGCTG
GTTGCGATCA CGGACCACCC CGTCCCGCGG ATCGAGGTGA CCCGCGACCC CGAGGAGGGC
GCGGTCGCGT ACGGCCCGTT CACGAGCAAG GGTCGCGTGG AGACGGTGGT GAAAGCGATC
CGCGACGAGT ACCGGCTTCG CGGCTGCTCC GACCACAAGT ACGCGAACCG GGACCGTCCC
TGTCTCGACT ACGAGATGGG GATCTGCTCG GCCCCCTGTA CCGGCGAGAT CGACCCCGAG
AGCTACGCCG AGGACGTTGC GGCCGCCCGC CGGTTCTTCG AGGGCGAGAC GGGCGTCCTC
GCTGACCCCC TGCGTCGGCG GATGGAGGCC GCCGCCGAGA ACGCGGAGTT CGAGCGCGCC
GCGAACCTCC GGGACCGGCT CGAAGCGGTC GAGGCGTTCC ACGGTGAGGG CGGCGAGGCC
GTGAGCGACC ACTCCGACGA CCGCACCGTC GACGTGCTCG CGGCCGCCGT CGAGGGCGAC
ACCGCTCGCG TGGCCCGGCT TCACAGCGAG CGCGGCCAGT TGGTCGACCG CAGTCGGCAC
CGGCTGGACG CGGCGGCGGT GGGAGACGAC GGCGAGGGAG ATGAAGATGG CTTCGCCGAC
CCCGACGCCA ACACGCCCGC CGCGGTGCTG TCAGCGTTCC TCACGCAGTA CTACGCCGAG
CGGGAGTTCC CGGACGCGAT CCTCCTCGCA GAGCGCCCGT CGGACCCCGA CGTGATCGAC
TGGCTGGAGG CGGAGGGGGT CTCGGTCCGC GTCCCCGGTG CGGGGCGGGA GGCGAAGCTC
GTCGAACTCG CCCTCAAAAA CGCCCGCAAG CGCGGCGGCC GTGAGGACCC CGTCGGCGCG
CTCGGCGAGC GACTCGGAAT CGACCGCCCG GCCCGGATCG AGGGGTTCGA CGTGAGCCAC
GCGCAGGGGA CCGCGGTGGT CGGCTCCGAC GTGTGCTTCG TCGACGGAAG CGCGGAGACG
AGCGACTACC GCCGGAAGAA GCTCACCGAC CGCAACGACG ACTACGCGAA CATGCGCGAG
TTGGTCCGGT GGCGCGCCGA GCGCGCGGTC GCCGGCGAGG ACGACCGCCC CGACCCCGAC
CTTCTCCTGA TCGACGGGGG CGGGGGGCAG CTCGGGGCCG CTCGCGACGC GCTCGCGGAG
ACCGGCTGGG ACGTTCCCGT TGTCGCGCTC GCGAAGGCCG AGGAACTGGT CGTGACCCCG
ACCGGCACCC GCCGGTGGCC GGACGACGCC CCCGAACTGC ACCTGCTCCA GCGCGTTCGC
GACGAGGCGC ACCGCTTCGC CGTCTCTTAC CACCAGACCG TCCGCGACGA GGTCAAGACG
GTCCTCGACG ACGTGCCCGG CGTCGGCCCC CAGACCCGCC GCCGGCTCCT GCGCCGGTTC
GGATCGGTCG AGAGCGTGCG CGATGCCTCC CTCGACGACC TCACCGACGT CGACGGCGTC
GGCGACGCGA CCGCCGACAC GCTCCGCGAA CGCTTATAA
|
|---|
| Protein sequence | MDADAVRERA ADLPTEPGVY QFRAGETTLY VGKAVNLRNR VRSYADPRSG RIRGMVGRAD
RIEFAVTDTE TQALLLEANL IKRLRPRYNV RLKDDKSYPL VAITDHPVPR IEVTRDPEEG
AVAYGPFTSK GRVETVVKAI RDEYRLRGCS DHKYANRDRP CLDYEMGICS APCTGEIDPE
SYAEDVAAAR RFFEGETGVL ADPLRRRMEA AAENAEFERA ANLRDRLEAV EAFHGEGGEA
VSDHSDDRTV DVLAAAVEGD TARVARLHSE RGQLVDRSRH RLDAAAVGDD GEGDEDGFAD
PDANTPAAVL SAFLTQYYAE REFPDAILLA ERPSDPDVID WLEAEGVSVR VPGAGREAKL
VELALKNARK RGGREDPVGA LGERLGIDRP ARIEGFDVSH AQGTAVVGSD VCFVDGSAET
SDYRRKKLTD RNDDYANMRE LVRWRAERAV AGEDDRPDPD LLLIDGGGGQ LGAARDALAE
TGWDVPVVAL AKAEELVVTP TGTRRWPDDA PELHLLQRVR DEAHRFAVSY HQTVRDEVKT
VLDDVPGVGP QTRRRLLRRF GSVESVRDAS LDDLTDVDGV GDATADTLRE RL
|
|---|
| |