Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2653 |
Symbol | |
ID | 7400858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2638724 |
End bp | 2639467 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643709725 |
Product | DNA polymerase sliding clamp |
Protein accession | YP_002567294 |
Protein GI | 222481057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGG CCATTGTAGG CGCGTCGACG CTACAGGACG CGCTCGATTC GGTGAGCGTG TTGGTCGACG AGTGTAAGAT CCGCCTAAAC GACGAGGAGC TCTCCATTCG GGCTGTCGAC CCCGCTAACG TCGGCATGGT CGATCTCACT CTCGAAGCTG CCGCGTTCGA GTCCTACGAG GCCGACGGCG GCGTCATCGG CGTCAATCTC GCCCGCTTAG AGGACATCGC CGGCATGGCC AACTCCGGCG ACCTGATCCA CCTCGAACTC AACGAGGAGA CCCGCAAGCT CCACATCGAG ATCGACGGGC TCTCCTACAC CCTCGCGCTC ATCGACCCCG ACTCCATCCG ACAGGAGCCG GATATCCCCG ACCTCGATCT CGCCTCCGAG ATCGTCGTCG AGGGCGCCCA GATTAACCGC GGGATCACCG CCGCCGACAT GGTCTCGGAC CACATCCGCC TGCGCGTCGA CGAGACCGAC GAGGCATTCT TCATCGAAGC CGAGGGCGAC ACCGACGACG TCGACCTGCG GCTCGCACGC GAGGACCTCA TCGCGCTCAC CGCCGGTCCC GCCGATTCAC TGTTCAGCCT CGACTATCTC AAGGACATGA ACAAGGCGAT TCCCTCCGAC GCCGAGGTCA CCATCGAGCT CGGCGAGGAG TTCCCCGTCA AGCTCCACTA CGGGTTCGCT GAGGGGCTCG GGCACGTTAC GTTCATGCTA GCCCCTCGCA TCCAGAGCGA CTGA
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Protein sequence | MFKAIVGAST LQDALDSVSV LVDECKIRLN DEELSIRAVD PANVGMVDLT LEAAAFESYE ADGGVIGVNL ARLEDIAGMA NSGDLIHLEL NEETRKLHIE IDGLSYTLAL IDPDSIRQEP DIPDLDLASE IVVEGAQINR GITAADMVSD HIRLRVDETD EAFFIEAEGD TDDVDLRLAR EDLIALTAGP ADSLFSLDYL KDMNKAIPSD AEVTIELGEE FPVKLHYGFA EGLGHVTFML APRIQSD
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