Gene Hlac_2629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2629 
Symbol 
ID7400834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2612959 
End bp2613516 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content64% 
IMG OID643709701 
Producttranscription factor 
Protein accessionYP_002567270 
Protein GI222481033 
COG category[K] Transcription 
COG ID[COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CGAAGGAGAC GATCACGATA GAGAACGTCG TTGCCTCCAC GGGGATCGGG 
CAGGAGCTCG ACCTCCAGAG CGTCGCGATG GATCTCGAAG GCGCCGACTA CGACCCGGAG
CAGTTCCCCG GGCTCGTCTA CCGCACCACG GACCCGAAAT CGGCCGCGCT GATCTTCCGG
TCCGGGAAGA TCGTGTGTAC GGGTGCCAAC TCCATCGACG CCGTCCACGA AAGCCTCGCC
ATCGTGTTCG ACGAGCTCCG CGGGCTCCAG ATCCCGATCG ATGACCCCGA GATCACGGTC
CAGAATATCG TTACTTCCGC AGATCTCGGT GAGAGCCTCA ACCTCAACGC GATCGCGATC
GGGCTCGGGC TCGAACACAT CGAGTACGAG CCGGAGCAGT TCCCCGGGCT CGTCTACCGG
ATCGACGAGC CCGACGTGGT GGCGCTTTTG TTCGGCAGCG GGAAGCTCGT CATCACCGGC
GGAACGAGCC CCGACGACGC TGCGGCCGCC GTCGACGTGA TCGTCGAGAA GCTCGACGGT
CTCGGGCTGT TGGCGTAA
 
Protein sequence
MTDPKETITI ENVVASTGIG QELDLQSVAM DLEGADYDPE QFPGLVYRTT DPKSAALIFR 
SGKIVCTGAN SIDAVHESLA IVFDELRGLQ IPIDDPEITV QNIVTSADLG ESLNLNAIAI
GLGLEHIEYE PEQFPGLVYR IDEPDVVALL FGSGKLVITG GTSPDDAAAA VDVIVEKLDG
LGLLA