| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2609 |
|---|
| Symbol | |
|---|
| ID | 7399835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2590815 |
|---|
| End bp | 2591897 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643709681 |
|---|
| Product | Sec-independent periplasmic protein translocase |
|---|
| Protein accession | YP_002567250 |
|---|
| Protein GI | 222481013 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0116884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.506463 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACT CGGACCGGTC GCGTGACGAG CCCTCAGCCC CCGAGGACGA CTCGGTCGAC
GGCGACGGGA CGGTCGACAG CGCCGATGCT ACATCGGACG AAGCGGTCGG AATGCCCGGC
GGTACGTCCG AGAATCGCCG ATCCGCTGGC GACGAGAACG GTGACGACAC CGGACCGGAA
TCCGTCGAGC CGGAGGTGTC TCCTGAAGTC ACGTCGGAGA TCGGCGCGGA CGCGGGCGAC
GCCGACAATT CGGACTCGTC GACCGTCGAG GATGCGCCGA CCGTTGAGGA CGGCGGCGTC
GCGAGCGAAA GGACCGCGAT CGAAGGGACC GCCGAAAGCG ACGAGGAGTT CGCGGGCCTC
GAGGCGCCCG AGACGGACGA GGAGATGCCG CTTGCGGCCC ACATCGAGGA GATGATGCGG
CGGCTCGCCG TCGTCTTCGT CTTCGGCGGG CTGGCGACGC TGGTCGTCGT CACCGAGTCG
ACGGAGCTCA TCAACTACTT CTGGGGCTAC CACATCCCCG CGCCCTTGGA GAACCGACCG
CGGCTGTACG GCCCCCTCGA ACTCCCGCTC ACGCGGCTGA AGGTCGCCGG CCTCGCCGGC
GTCGTGGTCG GACTGCCGGC GTTCGTCTAC CAGACGTACC GGTTCATGAA GCCGGGGTTG
TACGAGAACG AGCGACGCTA CTACCTCGCG GCGGTCCCCA CGAGTCTCAT CCTCGGCGGG
ATCGGCATCG CGTTCGCGCA CTTCCTCGTG TTGCCCGCGA TCTTCTCGTA CTTCACCACC
TACACGTCCG ACGCCGCGAC GATCGCGTTC GGCCTCGCAG AGACGTTCAA CCTGATCGTC
ATCATGCTCG CGTTCATGGC GATCGTCTTC CAGATCCCGC TGTTCATCAT GCTCGCGATC
ATGATGAACC TCGTCACCCG GCAGTGGCTG GAGGCGAAGC GGCTCATCTT CTGGGGGTCG
TTCCTCGGGA TCGCGTTCCT CTTCAGCCCC GACCCGACCG GGATGGCGCC GATTATCGTG
ACGCTCACCA TGATCGTGCT GTACGAGGGA ACGTTGGCGG TGCTGCGCTG GACCGGGAAC
TAG
|
|---|
| Protein sequence | MDDSDRSRDE PSAPEDDSVD GDGTVDSADA TSDEAVGMPG GTSENRRSAG DENGDDTGPE
SVEPEVSPEV TSEIGADAGD ADNSDSSTVE DAPTVEDGGV ASERTAIEGT AESDEEFAGL
EAPETDEEMP LAAHIEEMMR RLAVVFVFGG LATLVVVTES TELINYFWGY HIPAPLENRP
RLYGPLELPL TRLKVAGLAG VVVGLPAFVY QTYRFMKPGL YENERRYYLA AVPTSLILGG
IGIAFAHFLV LPAIFSYFTT YTSDAATIAF GLAETFNLIV IMLAFMAIVF QIPLFIMLAI
MMNLVTRQWL EAKRLIFWGS FLGIAFLFSP DPTGMAPIIV TLTMIVLYEG TLAVLRWTGN
|
|---|
| |