| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2426 |
|---|
| Symbol | |
|---|
| ID | 7400544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2414729 |
|---|
| End bp | 2416207 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643709499 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_002567071 |
|---|
| Protein GI | 222480834 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGGA AGGAGGTCGC TGAACCGGTG CTCACGCGGA TGCCCGTCGT GGAGCGACCC
GCGGGTCACG TTCCGTTCAA GCGGAAGCTC ATGTGGACGG CCGGCATCTT GGTCGTCTAC
TTCTTCCTGA CCAACATCAA CCCGTTTGGG TTGGCAGCCG GTCAGGGGTC TGACTTCTTC
GGGCAGTTCC GGTCGGTACT TGCCGGCTCG TCCGGCTCGC TGTTACAGGT CGGTATCGGA
CCGATCGTCA CGGCGTCCAT CGTCCTCCAG CTGTTGGGTG GTGCGAACCT GCTGGGGCTC
GATACCGACG ACCCGCGCGA TCAGGTCCTG TACCAGGGCC TCCAGAAGCT GCTGGTGGTC
ATCGTCACGG CGCTGACGGC CGCGCCGATG GTGTTCACTG GCGAGTTCCT GCCCGCGGAT
CCGGCCGTCG GACAGGCGCT CGGCATCGGG ACGTTCGGCG TCGAAGCGCT GATCTTCGTA
CAGATCTTCA TCGGTGGCGT CCTCCTCCTG TTCATGGACG AGATCGTGAG CAAGTGGGGC
GTCGGCTCCG GCGTCGGGCT GTTTATCATC GCGGCGGTGA GCCAGCAGAT CGTCGGCGGG
TTCTTCAGCT TCTCCGCGCT CGGCGCGTCC GGCTTCTTCG CAAGCTGGTA CGGCATCATC
GTCGGCGACG TGCCGGTGTC GCTGTCGCCG TTCACGGCGG AGGGGCTCCA GAACTTGCTG
TTCGATCCGG GGAACATCTT GGCGCTTTTC ACCACGCTGT TCATCTTCGG GATCGTCGTG
TACGCGGAGT CGGTCCGTGT CGAGATCCCG CTGTCGCACG CGCGGGTGAA GGGTGCTCGC
GGGCGCTTCC CGGTGAAGCT CATCTACGCG TCCGTTCTGC CGATGATCCT CGTTCGCGCG
TTGCAGGCGA ACATCCAGTT CCTCGGGCAA CTCCTCTCCT CGCAGTGGGC GGGGATGCCC
GGATGGCTCG GCGTCTACGG CAATCAGGGT CAGCCCCTCT CCGGGCTGTT CTACTACCTG
AACCCGATTC AGGCCCGTAC GGACTGGATG TGGTTCCTGG GTGAGATCCC GGCGTCAGTC
GAGCCGTGGA TGATCGCGGT TCGACTGATC ATCGACCTCA CCTTCATGGT TGTCGGCGGT
GCGATCTTCG CCATCTTCTG GGTCGAAACG ACCGGGATGG GCCCGGAGGC GACGGCGAAA
CAGATCCAGA ACTCCGGGAT GCAGATCCCC GGATTCCGCC GGAACCCGCA GGTCGTCGAG
AAGGTCATGG AGCGGTACAT CCCGCAGGTG ACTGTCATCG GCGGCGCCCT CGTCGGGCTG
CTCGCCGTCA TGGCGAACCT GCTCGGCACC ATCGGTCAGG TCTCCGGAAC CGGGCTGCTG
CTCGCGGTCT CTATCACGTA CAAGCTGTAC GAGGAGATCG CAGAAGAGCA GCTGATGGAG
ATGCATCCGA TGATGCGGCA GATGTTCGGC AACGAGTAG
|
|---|
| Protein sequence | MSWKEVAEPV LTRMPVVERP AGHVPFKRKL MWTAGILVVY FFLTNINPFG LAAGQGSDFF
GQFRSVLAGS SGSLLQVGIG PIVTASIVLQ LLGGANLLGL DTDDPRDQVL YQGLQKLLVV
IVTALTAAPM VFTGEFLPAD PAVGQALGIG TFGVEALIFV QIFIGGVLLL FMDEIVSKWG
VGSGVGLFII AAVSQQIVGG FFSFSALGAS GFFASWYGII VGDVPVSLSP FTAEGLQNLL
FDPGNILALF TTLFIFGIVV YAESVRVEIP LSHARVKGAR GRFPVKLIYA SVLPMILVRA
LQANIQFLGQ LLSSQWAGMP GWLGVYGNQG QPLSGLFYYL NPIQARTDWM WFLGEIPASV
EPWMIAVRLI IDLTFMVVGG AIFAIFWVET TGMGPEATAK QIQNSGMQIP GFRRNPQVVE
KVMERYIPQV TVIGGALVGL LAVMANLLGT IGQVSGTGLL LAVSITYKLY EEIAEEQLME
MHPMMRQMFG NE
|
|---|
| |