Gene Hlac_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2408 
Symbol 
ID7400526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2400249 
End bp2400491 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content64% 
IMG OID643709481 
Productconserved hypothetical selenoprotein 
Protein accessionYP_002567053 
Protein GI222480816 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3526] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02174] selT/selW/selH selenoprotein domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.72928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TCGAAGTCGA GTACTGCGTC CCGTGCGGCA TGTTGAACCG CGCCCGAGAT 
GTCTCGGAGG CGATCCTCAA GCAGTTCGGC GAGGAGATCG ACGAAGTCGC GTTAGTGACC
GGCGACGACG GTGTGTTCGT CGTGCGCGCC GACGGCGAGG TCGTCTTCGA CAAGACGGAA
GACGAGTACG ACGTGGACGC CATCGTGCGC GCGGTGAAAC CGTATGTCGG CGCGGCGGCG
TAA
 
Protein sequence
MTRIEVEYCV PCGMLNRARD VSEAILKQFG EEIDEVALVT GDDGVFVVRA DGEVVFDKTE 
DEYDVDAIVR AVKPYVGAAA