| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2229 |
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| Symbol | |
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| ID | 7399937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2214146 |
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| End bp | 2215348 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709301 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002566876 |
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| Protein GI | 222480639 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.224666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.568068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG ACGCGCTGTT GGGGAGCGTC GCGACCACGG AGGCCCGCCT CGCGGTGACC
GCCGGAATCT TGCTCGTGAC GCTCGCCGTC GGCTGGCTGC TCCTCCCGCG GGGCGTCCGG
GCCGCAGAGC GGGTCGTGAC GCACTGGCTG GAACGGTTCC TCGACGGACG GGCCGAGAGT
TCGATCGAGA CGCTACAGGA GGCCGTCCCG GTCTCGTTCG GGCTGCGGCT GTTCGTCGGG
CTCCTCCAGC TTGTGCTGTT CGCGATTGCG GCCGTTGCAA TCTTGGCGTT GTGGGGGCAG
TTCGCGGTCG TGGTCGCGGT GCTTCCGGTC GCGGAGAACG CGCTCACTAT CGGCGCACAG
GCGCTCCTCT CCGCGGTGCT TCTCGGCGCC GCCTACGTCG GGAGCGACGT GTTAGAGGAG
TACGTCGAGG ACCTCTCGGC CGACAGCGAC CGCATCACCG CCCACCAAGA GCAACTGCTC
AGTCGAATCA TGCAGGTGGG GGTGCTGGTG ATCGCAGGGA TAACCGTTCT CGGGATCTGG
GGCGTGAACC TCGGCGGCCT CCTCGTCGGC GCCGGGTTCC TCGGGATCGT GCTCGGGATG
GCGGCCCGCC AGACGCTCGG ATCGCTGATC GCCGGCTTCG TGCTGATGTT CGCACGCCCG
TTCGAGATCG GCGACTGGGT GGAGATCGGC GATCAGGAGG GGCTCGTCAC CGAGATCACG
ATCATGAACA CCCACATGCG GAACTTCGAC GGCGAGTACG TCGTGGTGCC CAACGACCTA
GTCACCAACC AGGCGATCAC GAACCGGAGC CGCGAGGGTC GGCTTCGGAT CCACATGGAG
GTCGGAATCG GCTACGACGA CGACCCCGAA GAGGCGAGCG AGATCGCCAA GGAAGTGTTA
GACGAGATCG ACACCATCGC CAACAACCCG AAGCCGTACG TGATCCCCTC CGGCTTCGGC
GACTCCGCAA TCTTGCTCGA CCTCCGTTTC TGGATCGACC CGCCGACCCC GCAGGCGCGG
TGGCGCTCGA AGGCGACCGC CGTTGAGGCG ATCCAGCGCC GCTTCGCGGA CGCGGACATC
TCCATCCCGT ACCCGCAGCG GACCGTCTCG TACCCGCCGG AGACGGCGGA GACAGACGAG
ACCGTCGAGC GTGTCGAGCG CTCGGCGAAC GGCAAGGGGC GGGTGGACAA CCGTCCCGCC
TGA
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| Protein sequence | MRLDALLGSV ATTEARLAVT AGILLVTLAV GWLLLPRGVR AAERVVTHWL ERFLDGRAES
SIETLQEAVP VSFGLRLFVG LLQLVLFAIA AVAILALWGQ FAVVVAVLPV AENALTIGAQ
ALLSAVLLGA AYVGSDVLEE YVEDLSADSD RITAHQEQLL SRIMQVGVLV IAGITVLGIW
GVNLGGLLVG AGFLGIVLGM AARQTLGSLI AGFVLMFARP FEIGDWVEIG DQEGLVTEIT
IMNTHMRNFD GEYVVVPNDL VTNQAITNRS REGRLRIHME VGIGYDDDPE EASEIAKEVL
DEIDTIANNP KPYVIPSGFG DSAILLDLRF WIDPPTPQAR WRSKATAVEA IQRRFADADI
SIPYPQRTVS YPPETAETDE TVERVERSAN GKGRVDNRPA
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