| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2226 |
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| Symbol | |
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| ID | 7399934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2208885 |
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| End bp | 2211755 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643709298 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002566873 |
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| Protein GI | 222480636 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.137389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.561287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACTG CGGACCACGA GACGGTGACC GGGCTCCCGC CGGGGATCGC CGCCGCCCGC
GAGGAGCTGA CACCGATGCT CTCGCAGTAC GCCGACCTGT GTGCAGCCCA CGAGGACGCC
CTCGTGTTGT TCCAGGTCGG CGACTTCTAC GAGGCGTTCT GCGAGGCGGC CGAGGCGGTC
GCCGGCGTCT GCGAGGTGAC GCTGACGGAG CGCTCCGACT CCACCGGCGA CTACCCGATG
GCCGGGATCC CCATCGACAA CGCCGCGCCC TACCTCGGAT CGCTCCTCGA TGCCGGCTAC
CGCGTCGCCC TCGGCGATCA GGTCGAAGAC GCCGAGCAGG CGTCCGGGCT CGTCGACCGC
GCCGTCACCG AGGTGATCAC TCCCGGGACC GTCGTCGAAG ACGAGCTGCT GGAGGCGGGG
ACGACGAACT ACGTGGCGGC GGTGGCGGGC GGAGGCGAGG ACGGCGAGAG CGACGACGCC
CCCGAGCCGG CCCCCGTCGG CCTCGCCGCC GTCGACGTCT CGACCGGCGA GTGTCTCGTC
ACCGCGGGCG ACCGCGACAC GGTCGCGGAG GAGCTCGACC GGATCGCACC CGCCGAGCTG
ATCGCGGGAC CGGACACCCC CGACTTCAAG CCGGCCGACG CCGAGCGCGG CTGGACGGTC
CACGAGTACG ATTCCGGCGT TTTCGAGCGG CGAGCCGCGA TCGAACGACT GGAGCCGTAC
CTCCCCGCGC CCGACCGCCG GTTTGACGGC GACGCCGAGC TACGTGCGGC TGGCGCCGTG
CTCGCGTACG CCGAGTACAC GCAGGGCGAC GACGGCCCGC TCTCGTACGT TACCCGGATC
CGGCGGTACG ACCCGCGCGA CCGGCTCCGG CTCGACGCGG CGGCCCAGCG CAGCCTCGAA
CTGTTCGAGA ACCGCGGACT GGGCGCGAGC GACACCCTGT TCGACGCGCT CGACGAGACG
AGGTGCGCGC TCGGCCGGCG GTGTTTAGAA CGGTGGCTCC GTCGCCCGCT CGTCGACGCC
GACGCGATCC GGAGCCGCCA CGACGCGGTC GGCGAGCTGG CCGATCGCAC CCTCGTCCGT
GAGGGAGTCG CCGACGCGCT CGCGGCCGCC TACGACCTCG AACGCCTCGT CGGACGGATC
TCCCGCGGAC GGGCCGACGC TCGCGACCTG CGCTCGCTGC ACGCGACGCT CGCGGTCGTG
CCGGATCTGA AGGCGACGCT GGCGGGGGGG AACGGTGGGG ACGATAGAGA GGGCGGAACC
GACGCCGACC GCCCCCGCAC CGACCACCTC CGCGACCTCC GCGACCGCCT CGACGAGCTG
ACCGAGGTCC GCGAGCTGAT CGACGACGCT ATCGCCGCAA ACCCCCCGCC GGAGATCACC
GAGGGCGGCG TGATCGGCGA GGGGTTCGAC GACGACCTCG ACGCCCTCCG CGCCACCGAG
CGCGAGGGGC GCGAGTGGGT CGCAGACTTG GAGGCGAGCG AGCGCGAGCG CACCGGGATC
GACTCGCTGT CGGTCGGCCA CAATCAGGTC CACGGCTACT ACATCGAGGT GACCGACGCC
AACCTCGACC GCGTCCCCGA CGACTACCGC CGCCGACAGA CGCTGAAGAA CAGCGAGCGC
TACTACACGC CCGAACTGAA GGAGCGCGAA GAGGAGATCG TCGGCGCCGC GGAGCGCGCG
GACGCCTTGG AGTACGAGCT GTTCGTCGAC GTGCGCGAGC GCGTCGGGAG CGAGACGGAA
CGGATACAGG GGCTCGCGGA CGCGATCGCC GAGATCGACG CGCTCCGCTC GCTGGCGACC
GTCGCCGTCG AGTACGACTA CGTCCGCCCG GAGATCGTCG ACGAACCCGC TTCCGATACG
AACGCCGGCG TCGAGATCGA AGGGGGCCGC CACCCGGTCG TCGAGCGCGC CGAGGAGTCG
TTCGTCCCGA ACGACGCGGA CCTCCCGCGC GGGTCGATCG CGGTTATCAC GGGGCCGAAC
ATGAGCGGGA AGTCAACGTA CATGCGGTCG GTCGCGCTCG CGGTCGTGTT AGCGCAGACC
GGCTCGTTCG TCCCCGCGCA GGCGGCCTCG CTCCCCGTCT TCGACCGGCT GTTCACCCGC
GTCGGCGCCT CCGACGACAT CGCCGGCGGC CAGTCGACGT TCATGCGCGA GATGAGCGAG
CTGACCGAGA TCCTCCACGA CGCCGGCCCG GACTCCCTCG TCCTCCTCGA CGAGGTGGGC
CGCGGTACCG CCACGACCGA CGGGCGGGCC ATCGCCCGCG CGGCCGCCGA GTTCATCCAC
GACGAGCTCG GCGCGACCGC CATCTTTGCC ACCCACTACC ACGACCTGAC CGACCTCGCG
GCTGAGCGCG AGCGCGTCTT CAACCTCCAC TTCACGGCGA CCCGCGAGGA CGGCGACGTG
ACGTTCCTCC ACCGGATCGT CCCCGGCGCC TCCTCTTCCT CGTACGGCGT CGAGGTCGCC
GAACTCGCCG GCGTGCCGGC GCCCGTCGTC GAGCGGTCCC GTTCGCTGGT GACCGCCGAC
ACTGCGGGTG GCTCCCCTGA CAGCGAAGCC GCGTCGGAGG ACGACGAGTC GGATGGGCGG
GACGCACCGG CCGAGGAGGA GAAGCCGGAC AGCGTTTCGC TCCGCGAGTT CCTCGCCGAG
GAGAGCGCGG GCGACGACGC CGACGACACC CCGAGCGCGA GCGACGACGT TCCAAACGCG
AGCGACACGG ACGGCAATAT CGACACCCCG ACCGCAGACG ATCGGGCCGG AGTCGACGCC
GAAAGCGACC TGACCGCCGA TCTCCGCGAT CTCGACCTCG CCCGGATGAC GCCAATAGAG
GCGCTGAACG CCCTCCACGA CCTCCAGTCG CGAGCCGACG ATGACGGGTG A
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| Protein sequence | MPTADHETVT GLPPGIAAAR EELTPMLSQY ADLCAAHEDA LVLFQVGDFY EAFCEAAEAV
AGVCEVTLTE RSDSTGDYPM AGIPIDNAAP YLGSLLDAGY RVALGDQVED AEQASGLVDR
AVTEVITPGT VVEDELLEAG TTNYVAAVAG GGEDGESDDA PEPAPVGLAA VDVSTGECLV
TAGDRDTVAE ELDRIAPAEL IAGPDTPDFK PADAERGWTV HEYDSGVFER RAAIERLEPY
LPAPDRRFDG DAELRAAGAV LAYAEYTQGD DGPLSYVTRI RRYDPRDRLR LDAAAQRSLE
LFENRGLGAS DTLFDALDET RCALGRRCLE RWLRRPLVDA DAIRSRHDAV GELADRTLVR
EGVADALAAA YDLERLVGRI SRGRADARDL RSLHATLAVV PDLKATLAGG NGGDDREGGT
DADRPRTDHL RDLRDRLDEL TEVRELIDDA IAANPPPEIT EGGVIGEGFD DDLDALRATE
REGREWVADL EASERERTGI DSLSVGHNQV HGYYIEVTDA NLDRVPDDYR RRQTLKNSER
YYTPELKERE EEIVGAAERA DALEYELFVD VRERVGSETE RIQGLADAIA EIDALRSLAT
VAVEYDYVRP EIVDEPASDT NAGVEIEGGR HPVVERAEES FVPNDADLPR GSIAVITGPN
MSGKSTYMRS VALAVVLAQT GSFVPAQAAS LPVFDRLFTR VGASDDIAGG QSTFMREMSE
LTEILHDAGP DSLVLLDEVG RGTATTDGRA IARAAAEFIH DELGATAIFA THYHDLTDLA
AERERVFNLH FTATREDGDV TFLHRIVPGA SSSSYGVEVA ELAGVPAPVV ERSRSLVTAD
TAGGSPDSEA ASEDDESDGR DAPAEEEKPD SVSLREFLAE ESAGDDADDT PSASDDVPNA
SDTDGNIDTP TADDRAGVDA ESDLTADLRD LDLARMTPIE ALNALHDLQS RADDDG
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