Gene Hlac_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2164 
Symbol 
ID7401097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2152598 
End bp2153062 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content71% 
IMG OID643709234 
ProductUspA domain protein 
Protein accessionYP_002566811 
Protein GI222480574 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACA CGATCGTGAT CGCGACCGAC GGTTCCGACA GCGTCCGCCG GGCCGTCGAC 
GTCGCGGTCG ACGTCGCCGC GCGGTTCGAC GCGGAGGTCC ACGCCGTCTA CGTCGTCGAC
AGCGGCGAGG TCGAGTCCAC GCCGGACGAG GTCCGCGACG ACCTCCGCGA TGCGCTCGAC
GATCACGGTG AGGCCGCGCT CGACCAGGTG ACCGACGCCG CGACCGCGCG CGACGCCGAC
CTCGACATCA CGATCGAGGC ACGCGAGGGA CGGCCGGCGG CCGAGATCTC CAAGTACGCG
CGCGAGATCG ACGCCGACGT GGTCGCGATG GGGACGCGCG GGCGACACGG GGAGAATCGG
TTCCTCATCG GCTCGGTCGC CGAGCGCGTC GTCCGGACGT GTCCGATTCC CGTGCTCACC
GTCCGACAGC TCACCGACGA GGACCCGCGG CGGACGACAA TCTGA
 
Protein sequence
MFDTIVIATD GSDSVRRAVD VAVDVAARFD AEVHAVYVVD SGEVESTPDE VRDDLRDALD 
DHGEAALDQV TDAATARDAD LDITIEAREG RPAAEISKYA REIDADVVAM GTRGRHGENR
FLIGSVAERV VRTCPIPVLT VRQLTDEDPR RTTI