| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2060 |
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| Symbol | |
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| ID | 7402079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2049953 |
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| End bp | 2051746 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643709131 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_002566708 |
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| Protein GI | 222480471 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.280189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.136093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC ACACAAACGC GGACACTCTT CGGACGCCGA TCGTCGCCGT GCTGGGCCAC
GTCGATCACG GCAAGACCAG CCTGCTCGAC ACGATCCGCG GCTCCGCCGT CAGCGAGGGC
GAAGCCGGCG CGATCACGCA GCACATCGGG GCGACTGACA TCCCGCTCGA CACCATCTCC
GAGATGGCGG GCGAACTCAT CGATCCGACC GACTTCGACC TGCCGGGGCT TCTCTTTATC
GACACGCCCG GCCACCACTC TTTCTCGACG CTGCGCGCCC GCGGCGGTGC GCTCGCCGAC
ATCGCGGTGC TCGTTGTCGA CGTTAACGAC GGGTTCCAGC CGCAGACGGA GGAGGCGATC
GACATCCTCA GACGCACCGG GACACCCTTC GTCGTCGCCG CCAACAAGGT GGACACGACG
CCGGGATGGA ACCCGCAAGA CGGCCAGCCG ATACAGCGGA GCCTGGAGGC GCAGTCGGAG
CGCGCCGAGT CGATGCTCAA CGAGAACCTC TACGAGATCA TCGGCCAGCT CTCGGACGCC
GGCTTCTCCG CCGACTTGTA CTGGCGCGTG CAGGACTTCC AGAAGAACAT CGGCGTCGTC
CCCCTCTCGG CGATCACGGG CGAGGGCGTC CCCGACCTGC TCACGGTCCT GATGGGTCTC
TCACAGCGGT TCATGAAAGA GGAGATGGCG ATCGACGTGC AAGGTCCCGG CGAGGGGACG
GTCCTAGAGG TAAAAGACGA GCGCGGCTTC GGCGCCACCA TCGACACGGT CGTGTACGAC
GGCGTGGTGC GCAACGGCGA CCAGATCGTC GTCGGCGGGC AAGACGAGCC GATCGTCACC
GAGATCCGGG CGCTGCTGCA GCCGCGTCCC CTCGAAGAGA TCCGCACGGA GAAGAAGTTC
GAGAAGGTGG CGGAGGTCGG CGCCGCTGCC GGGGTAAAGA TCGCTGCGCC CGACCTCGAT
CGGGCGATGG CGGGCGCGCC GGTTCGGGTC GTCCGCGACC GCCCGGTCGA GGAGGTCGTC
GAGGAGGTGA AAGCCGAGCT CGCGGAGATC GAGGTGGAAA CCGCCGAGAA CGGCGTCGTC
GTCAAGGCGG ACACGCTCGG ATCCTTAGAG GCGATGGCGA ACGCGCTCCG CGAGGCGGAG
GTCCCCATCC TGCGCGCTGA GGTCGGCGAC ATCGCGCCCC GCGACATCGC CGTGGCCGAG
ACCGCGAACC AAGACGAGCA CAAGGCCATC CTCGGGTTCA ACGTCGATCT GCTCGCGAAC
GCCGAGACGG AGCTTGAGAA CGCCGACGTG AAGCTGTTCA CCGACGAGGT CATCTACCAG
CTGATCGAAG ACTACGAAAC GTACGTCGAG GAGAAACAGC GCGCCCAGCA GGAGACGGTG
CTGGACAAGG TCGTCCGCCC CTCGCGGTTC CGCATCCTCC CCGACCACAC GTTCCGCCAG
AACGACCCCG CGGTCGTCGG CGTCGAGGTC ATCTCCGGCA CGGTTCAGAA CAACCGCAAC
GTCGGATACT TCGAGGGTAA CGAGTTCGAG CGCGTCGGCC AGCTCTCCGG CATTCAAAAG
CAGGGCGACG ACGTCGACGA GGCGCGCGCC GGCGAGCGCG TGAGTATCGC CATCGACGGC
CCGACCGTCG GGCGCGACAT CGAGGAGGGC GACACTCTCT GGACCGAAAT CCCCGAAAAA
CACGCGAAGA TCCTCGAACA GGAGTTAAAA GAGGAGATCA CGGCCGACGA GCGCGAGGCG
CTCGCGGCGT ACTTGGAGAC CAAGCGGAAG CGGGACCCCT TCTGGGGGAA GTGA
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| Protein sequence | MTDHTNADTL RTPIVAVLGH VDHGKTSLLD TIRGSAVSEG EAGAITQHIG ATDIPLDTIS
EMAGELIDPT DFDLPGLLFI DTPGHHSFST LRARGGALAD IAVLVVDVND GFQPQTEEAI
DILRRTGTPF VVAANKVDTT PGWNPQDGQP IQRSLEAQSE RAESMLNENL YEIIGQLSDA
GFSADLYWRV QDFQKNIGVV PLSAITGEGV PDLLTVLMGL SQRFMKEEMA IDVQGPGEGT
VLEVKDERGF GATIDTVVYD GVVRNGDQIV VGGQDEPIVT EIRALLQPRP LEEIRTEKKF
EKVAEVGAAA GVKIAAPDLD RAMAGAPVRV VRDRPVEEVV EEVKAELAEI EVETAENGVV
VKADTLGSLE AMANALREAE VPILRAEVGD IAPRDIAVAE TANQDEHKAI LGFNVDLLAN
AETELENADV KLFTDEVIYQ LIEDYETYVE EKQRAQQETV LDKVVRPSRF RILPDHTFRQ
NDPAVVGVEV ISGTVQNNRN VGYFEGNEFE RVGQLSGIQK QGDDVDEARA GERVSIAIDG
PTVGRDIEEG DTLWTEIPEK HAKILEQELK EEITADEREA LAAYLETKRK RDPFWGK
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