| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1994 |
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| Symbol | |
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| ID | 7402013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1988704 |
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| End bp | 1989972 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709065 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_002566642 |
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| Protein GI | 222480405 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0532904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTAC CCGTCGAGAT CGTCTTCGGG ATCTACCTCG GCATCATCAC CGGGATCGTT
CCCGCGCTGG TGGCCGGGGT ACTCGGGTTC GTCTTTAAGT ACGTGACCGA CGTGACCATC
CCCGGGCTCG GGGTGGTCGT CCTCGCGCTC GCGATCGCCG GTATCAACGG GGGGCTGCTC
GCCCTCAATG ACGAAACGAT CCGGTCGTCG GAGCGTGCAC CGGCGATCCT CACGGCGATC
ATCGTTGTGT TGATGATCTC TCTGTACGCC CACGCGCAGG GGGACCGACT CGGCGCCAGC
GTCCCGAAGC GGATCTCGCT CAAACAGCTC CGGAACCGAA CCCTCTCGAC CGACGTGATC
GAGCTTGTCG GCGGCCGAGG ACGAGTCTCC GTCGAGGTGA CTGGCGAGGT GAACGACATG
GAGGGATACC CGCCGCTGCC GACCGAGACG CGCCGGTCGA TCCTCGATGG CGACTGGACG
TTCCCGGCTG ACCTCCCGCT CGCGGAGCTC GAAGAGCGGT TCGCGGAGCG GTTACAGACC
GAACTCGATC TGGCCGACGT GACGGTCCGG ATCGACGAGC AGGCGCGTGC GACGGTGGCC
GCCGCGCCGC CGACGGGAGC GCTCTCGAAG CGGGTTCCGG TCGGGAAGCG TGCGGTGTCG
GTATCGGCAC TCGTGCCGAC CGGGATCGCC CGCGGCGACG TCGTCCGCGT GGTGACACCA
GACCTCGACA TTGAGGGAGC CGTGCTCGCC GCCCGATCGA GCGGAAAGCC GGAAGCGGGG
GCCGCCGTGG CGCCTGCTCC CGCGTCTGCT GCCAGCGACG AGCCGGAGCC CGACGACGAC
CTCCGGACCG ACGGCGGAGA GGAGACCGTC GCCTCCCTCC CGGCGGCGAC CGCACCCACG
ACGACCGGCG GAGAGGGGCG GGTGACGGTT GCCGTCGACC GCTCGGAGGC GACGGCGCTC
CTGCGCGCCG ACCGGGGGCG CGTGCTGGTG CTGTCGCGGG GAACTCGCCG CGAGTACGAG
CTCACGGCGC TGTTACGGCG GACCGGCAAG CGGTTCCGGA AGGTCTCGGT CGTCGCCGGT
GGGCCGTTGG ACGGGCACAC TATCGGCGAG GCCGAGATCC GCGAGGCGTA CGACGTGGCT
GTCCTCGCGG CGCGCCACGA ATCGTGGACG ATCGCGCCCG GCGGGTCGCA GTCGCTGTCG
GCGGGCGACG ATCTGTTCGT CGTCGGGAGT CGCGACGCGC TCGACCGCTT CGTGGAGGTG
GCCGCGTGA
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| Protein sequence | MSLPVEIVFG IYLGIITGIV PALVAGVLGF VFKYVTDVTI PGLGVVVLAL AIAGINGGLL
ALNDETIRSS ERAPAILTAI IVVLMISLYA HAQGDRLGAS VPKRISLKQL RNRTLSTDVI
ELVGGRGRVS VEVTGEVNDM EGYPPLPTET RRSILDGDWT FPADLPLAEL EERFAERLQT
ELDLADVTVR IDEQARATVA AAPPTGALSK RVPVGKRAVS VSALVPTGIA RGDVVRVVTP
DLDIEGAVLA ARSSGKPEAG AAVAPAPASA ASDEPEPDDD LRTDGGEETV ASLPAATAPT
TTGGEGRVTV AVDRSEATAL LRADRGRVLV LSRGTRREYE LTALLRRTGK RFRKVSVVAG
GPLDGHTIGE AEIREAYDVA VLAARHESWT IAPGGSQSLS AGDDLFVVGS RDALDRFVEV
AA
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