Gene Hlac_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1917 
Symbol 
ID7399869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1920269 
End bp1921201 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID643708988 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002566565 
Protein GI222480328 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAC AGACCGCTCC CGCGCCGGAC CGACCGTCGA CGAGAGACGA CGTACAGTTC 
GCGACGGTCG AGGAAACGGG CGACCGACGG CTCGCGTACG CGGAGTACGG GGCGGAAAAC
GGCTCTCCGA TGGTGTTTCT CCACGGGACG CCGGGTTCGC GCCGGCTCGC GGAGCTGTTC
GAGTCGACGG CGCGGGACAC TGATGTCCGT ATACTCGCAC CGGACCGTCC CGGATACGGT
CGATCCGACC CCTGGTCCGA CCGATCGATA CGGGACGGCG GGCGAGTCGT CCGCACCGTA
CTCGACCACG CCGGGATCGA CACTGCGCGT CTCGTCGCGT TCTCGGGCGG CGCCCCGTAC
GCGTTCGCGG CCGCGGCGGC GCTGCCGAGT CGGATCGATC GACTGGACGT GGTCGCCGGC
GCGACCCCGC CGGAGTACGC TCGCGAGCGT CCCACGACAC AGCGAGTGTT GAACTGGATC
GGATCGACGG CGCCCTCGGT GCTCGCCGCG CTGTTCCGCG CCCAGCGGTG GGTGGCACAG
CGCCGCGACC CCTCGTTCGT CGTCGCCCAG TACACTACCG GCGATCCGAC CGACGCCGTG
TCCGACCACG CGGCGGAGAT CGTCCGGGCG GACTTCCTCG AAGCGCTTGC CCGCAACCGC
AGCGGCGCAG TCACCGAGTT CCGACAGATC GCGGCCGATT GGAACGTCGA CTTCGAAGCG
ATCGACGCGG CGGTTCGGTT CTGGCACGGC GGCGACGACG CGAACGTCCC GATCGCTGCC
GTTCGACGGT TCGAGGCGGA GCTACCGACC GCCCGGCTAG CGGTGCTCGA CGGTGCAGAC
CATCTCCAGA CGCTGCTTCG CTCCGTCCCC GAGATTCTGA ACGACTCCTC GTCACCTGCG
CGACGGAAGA CGGCGACCGA AACCGGCATT TAA
 
Protein sequence
MMTQTAPAPD RPSTRDDVQF ATVEETGDRR LAYAEYGAEN GSPMVFLHGT PGSRRLAELF 
ESTARDTDVR ILAPDRPGYG RSDPWSDRSI RDGGRVVRTV LDHAGIDTAR LVAFSGGAPY
AFAAAAALPS RIDRLDVVAG ATPPEYARER PTTQRVLNWI GSTAPSVLAA LFRAQRWVAQ
RRDPSFVVAQ YTTGDPTDAV SDHAAEIVRA DFLEALARNR SGAVTEFRQI AADWNVDFEA
IDAAVRFWHG GDDANVPIAA VRRFEAELPT ARLAVLDGAD HLQTLLRSVP EILNDSSSPA
RRKTATETGI