Gene Hlac_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1860 
Symbol 
ID7400053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1864440 
End bp1865333 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content72% 
IMG OID643708930 
Productbeta-lactamase domain protein 
Protein accessionYP_002566508 
Protein GI222480271 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.150092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA CCGTCCTCGG ATCCGGCAGC GCGATGCCGG TCCCGGACCG CGTGCAGGCG 
GGCTACCTCC TCGACGACGG CGACCGTTCC CTCCTCGTCG ACTGTGGCAG CGGCGTCCTC
CAGCGGCTGG CCGGCACCGA GACCGGCTAC GAGGGAGTCT CGACCGTTCT CTTGACGCAT
CACCACCTCG ACCACGTCGC GGCGCTGCTC CCACTGATGA AGGCCCGATG GCTCGCCGGC
GAGGAGCATC TGGAGGTCGT CGGCCCGGCC GGAACCAAAT CGCTGCTCGA CGGGCTGCTC
GACGTTCACG AGTACCTCGA CGGGCGGATC GATCTGGCGG TCCGCGAGGT GTCGGCGGCC
CGGCCCTTCG CGGCGGCCGG GTTCGACGTG ACCGCCCGCG AGACGCGCCA CTCGATGGAC
GGGTTCGCCT ACCGGTTCTC GCCGCCGAGC GCCGATTTCG ACCCCGCGAA CGGGCCGCTC
ACGCTCTCGG GGGACACGGA GGCGTTCGCG GGCATGGCGT CGTTCGCCGA CGGGAGCGAC
CTGCTGGTCC ACGACTGCTC GTTCCCGGAC GGGACCGACG TGTCGAACCA CCCGAACCCC
ACGCAACTGG GGGAGTCGCT CGCGGGCACC GATATCGACA CGCTGCTGCT CTCGCACCTG
TACCCGCACA CCGGGGGTCG CGAGCGCGAG ATGGCACAAA GCGTCCGGGA CGCGGGGTTC
GACGGCGACG TCGAGGTCGC CAGCGACGGG CTCCGGGTCG CGATCGCCGA GCGATCCGGG
TCCGCGGGTG ACGGTTCGGC TGCCGGTGCG GGCGAGGCGA ACGAGGCGGA CGAGGCGGAC
GAGGCGGACG AGACGGATGA GGCGGACGAG GCGGCCGAGG CGGACGGGAC GTAA
 
Protein sequence
MELTVLGSGS AMPVPDRVQA GYLLDDGDRS LLVDCGSGVL QRLAGTETGY EGVSTVLLTH 
HHLDHVAALL PLMKARWLAG EEHLEVVGPA GTKSLLDGLL DVHEYLDGRI DLAVREVSAA
RPFAAAGFDV TARETRHSMD GFAYRFSPPS ADFDPANGPL TLSGDTEAFA GMASFADGSD
LLVHDCSFPD GTDVSNHPNP TQLGESLAGT DIDTLLLSHL YPHTGGRERE MAQSVRDAGF
DGDVEVASDG LRVAIAERSG SAGDGSAAGA GEANEADEAD EADETDEADE AAEADGT