| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1644 |
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| Symbol | |
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| ID | 7399594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1666189 |
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| End bp | 1667190 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643708711 |
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| Product | integrase family protein |
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| Protein accession | YP_002566299 |
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| Protein GI | 222480062 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.104877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAC AAATCGAACC CGAACGCGCA GTAGAACGGT ACCTAAACGA ACGCCGGGCG
GACATTTCTG AGTCCACCTA TTACAACCAC TCATCCCTGC TGTCACAGTT CATTGAGTGG
TGTGAGGCCG AAGGTCTGGA CTACGTCAAC GAACTTGACG GGTTCCACAT CTCCGACTTC
AAAATCCATC GCCGGGACGA GGATGGTATC AACAAAGTCA CACTCTACAA TCAGATGACT
GTCCTTCGCG TCTTCCTCCG GTGGTGTGAA TCACGCAGTC TGGTTGAAGA CCTCGCGGAG
AACATCTTGA TGCCGGTTCC CGAAGATGAC TCTCGGGACA CGATGATCGA CTCGGAGACG
TCCGCACAGA TCCTCCAATA CCTCCAAAAG TACGAATATG GGACGTTGAA ACACACGGTA
TTCTCGCTCC TGTGGGACAC CGGGTTCCGT GTGGGAACTC TCCGAGCGGT CGATCTTGGA
GATTACCATT CAGAGAAACA GTTCATTGAG GTGGAACACC GTGCGGAGAC TGGTACACCG
CTCAAGAACA AGTACGGAGC CGAACGTGAA GTGAATCTCC ATGAATGGGT GTGTGACGTG
ATCGACGACT ACGTCGAAAT GTACAGGCAC GACATAACCG ATGACCACGG ACGGGAACCA
CTAATCACGA CGGAACAAGG TCGTCCTGTT CGGTCGAACA TACGTGGCCA CATTAACTCC
ATGACGCGCC CCTGCGTGTA CGCGGGCAGG TGCCCCCACG ATAGGGATCC AGATAGTTGC
GAAGCCGCGC AGCGACGGGA CGCAGCCGCA CGGTGTCCTG GTTCGGTTCC TCCTCACGCA
ATTCGTCGGT CCGCGATCAC AGCATGGCTC AACGATGGCC ACACAAAGGA ACTCCTCTCC
GATAGGATGA ACGTCTCCGT GAAGACGCTG GAGAAGCATT ACGATGCCCG GACGGAAAGC
GAAAAGCGGG AACTTCGCCG CGAGGAGTTC GGGATGGAGT AG
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| Protein sequence | MTRQIEPERA VERYLNERRA DISESTYYNH SSLLSQFIEW CEAEGLDYVN ELDGFHISDF
KIHRRDEDGI NKVTLYNQMT VLRVFLRWCE SRSLVEDLAE NILMPVPEDD SRDTMIDSET
SAQILQYLQK YEYGTLKHTV FSLLWDTGFR VGTLRAVDLG DYHSEKQFIE VEHRAETGTP
LKNKYGAERE VNLHEWVCDV IDDYVEMYRH DITDDHGREP LITTEQGRPV RSNIRGHINS
MTRPCVYAGR CPHDRDPDSC EAAQRRDAAA RCPGSVPPHA IRRSAITAWL NDGHTKELLS
DRMNVSVKTL EKHYDARTES EKRELRREEF GME
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