| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1563 |
|---|
| Symbol | |
|---|
| ID | 7401496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1583206 |
|---|
| End bp | 1583796 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643708630 |
|---|
| Product | CinA domain protein |
|---|
| Protein accession | YP_002566220 |
|---|
| Protein GI | 222479983 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA GCGGGAGCGG GAAGGGGACC GAGAGTGAGG AGGGAACCGG AAGCGCCGAC
GAGATCGCCG GGACCGACGA GTCGGAGCCG ATCGAGAAGA CGCTCGGCGA CCTGCTGACC
GAACGCGGGG AGACCCTCGC GACCGCGGAG TCGCTGACAG GGGGACTCGT CGGGTCGCGT
GTGACCGAAG TGCCGGGCGC GAGCGCCTAC TTCGACCGCG GGTTCGTGAC CTACGCGTAC
GACGCCAAAC GCGAACTGCT CGGAGTGTCT CGCGAGTCGC TCGACGCCGA GGGCGCCGTG
AGCGCGGCGG TCGCCGAGCA GATGGCGGCG GGTGCGCGCG ACCACGCCGA CACGACGTGG
GCTGTCGCCA CGACCGGAAT CGCCGGGCCG GACGGCGGCA CCGCGGAGAA GCCGGTCGGA
CTCGTGTACG TCGGGGTGGC TTACGCCGCG CCGTGGGGGA CCGAGGCGTC GTTCGTTCGC
ACGGAGCGGG TCGTCCTCAA CGGCGACCGC GGCGCCGTGA AACGGAAGGC GGTCGACACA
GCGCTGGACG CGCTCGTCCG GACGATCCGC GAGGTCGACG CCGAGGAGTG A
|
|---|
| Protein sequence | MDESGSGKGT ESEEGTGSAD EIAGTDESEP IEKTLGDLLT ERGETLATAE SLTGGLVGSR
VTEVPGASAY FDRGFVTYAY DAKRELLGVS RESLDAEGAV SAAVAEQMAA GARDHADTTW
AVATTGIAGP DGGTAEKPVG LVYVGVAYAA PWGTEASFVR TERVVLNGDR GAVKRKAVDT
ALDALVRTIR EVDAEE
|
|---|
| |