Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1556 |
Symbol | |
ID | 7401488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1576225 |
End bp | 1577637 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708622 |
Product | type III restriction protein res subunit |
Protein accession | YP_002566213 |
Protein GI | 222479976 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCC GGCTGACCTA CGAGGACGGG ACGATCCGGG TCGTCGCTGG CGACGCCACT GGCAACGGTG CGAACGATGC CGACGGCGAC GCTCTGGAGT CGCTCCCGCC GCTCCCCGGC GTCGAGAGCG ACCCGCGATC GGGGACCGGG CGCGCCCCGG CCTACCGCTA CGCCGCGATC CGACGAGCCT TGGAGGTCGC CGGCGTGAGC GTCGAGGATC ACGTGCTGGA CGCGAGCGAC CGCGCGGGAG CGGCAGCCGG GCTCGACACC GGCCTTTCGA CCGACTACGA TCTCCGGGAG TACCAGCGTG AGGCGCTCGA CGCGTGGCGC GACGCCGGCG ACCGCGGCGT GCTCGAACTC CCGACCGGGG CCGGCAAGAC CGTGATCGCA ATACGCGCGA TGGTCGAGCT AGGCGTGCCG ACCCTCGTCG TAGTGCCCAC GGTCGATCTC CTCAATCAGT GGCAGCGGGA GCTAGAAGCG GAGTTCGACG TACCAATCGG GCGGTTCGGC GGCGGCGAAC AGCGCCAAGA GGCGATCACG GTGTCGACGT ACGACTCTGC GTACCTGAAA GCCGAGGATA TCGGCGACGC CTTCGAGTTC GTCGTCTTCG ACGAGGTCCA CCACCTCGGC GGCGAGGGGT ATCGTGACGT GGCGCGGCTG CTCGCGGCGC CCGCCCGGCT CGGGCTCACC GCCACCTTCG AGCGCCCCGA CGACGCGCAC GAGACCGTCG CAGAGCTGAT CGGCGACCGC GTGTACGCGC TCGACGTGGA CGACCTCGCG GGCGACCACC TCGCCTCCTA CGACATCCGA CGGATCGAGG TGGAGCTGAC GCCCGACGAG CGCGAGCGCT ACGACGCGAA GCAGGGCACC TTCGTCGAGT ACGTCCGGGA CGCGGGGATC ACGTTCACGA GCGGGAGCGA CTATCAGGAA CTCGTCAAGC GCTCCGGCAA CGACCCGGCC GCGAGGGAGG CGCTCCTCGC GAAACAGGAC GCCCGCGAGA TCATGATGAA CGCGCGCCGG AAGATCGACC GCTTGGAGTC GATCCTCGAC CGCCACCGCG ACGACCGCGT GATCGTGTTC ACCGCCCACA CCGACCTCGT CTACCGGCTT TCCGAGCGAT TCCTGCTGCC CGCGATCACC GCCGAGACGG GCGCGAAGGA GCGCCGCGAG ATTCTGGAGC GCTTCCGCGA GGGGACCTAC GGTCGGGTCG TCGCCGCCAA CGTCCTCGAC GAGGGCGTCG ACGTGCCCGA CGCGAACGTC GCGGTCGTGC TCTCCGGCTC GGGGAGTGAA CGAGAGTTCA CCCAGCGGCT CGGGCGGGTG CTCCGTCCCA AAGACGACGG TGGGCGGGCG ATCCTCTACG AGGTCGTCAG CACGGAGACC GCGGAGGAGC GGGTGGCGAG CCGGCGGCGG TGA
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Protein sequence | MDVRLTYEDG TIRVVAGDAT GNGANDADGD ALESLPPLPG VESDPRSGTG RAPAYRYAAI RRALEVAGVS VEDHVLDASD RAGAAAGLDT GLSTDYDLRE YQREALDAWR DAGDRGVLEL PTGAGKTVIA IRAMVELGVP TLVVVPTVDL LNQWQRELEA EFDVPIGRFG GGEQRQEAIT VSTYDSAYLK AEDIGDAFEF VVFDEVHHLG GEGYRDVARL LAAPARLGLT ATFERPDDAH ETVAELIGDR VYALDVDDLA GDHLASYDIR RIEVELTPDE RERYDAKQGT FVEYVRDAGI TFTSGSDYQE LVKRSGNDPA AREALLAKQD AREIMMNARR KIDRLESILD RHRDDRVIVF TAHTDLVYRL SERFLLPAIT AETGAKERRE ILERFREGTY GRVVAANVLD EGVDVPDANV AVVLSGSGSE REFTQRLGRV LRPKDDGGRA ILYEVVSTET AEERVASRRR
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