Gene Hlac_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1497 
Symbol 
ID7400325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1503776 
End bp1505848 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content68% 
IMG OID643708559 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002566155 
Protein GI222479918 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACT GGCTGTCACA CCGCGTCGTC TCCTCGCCGG ACGACACCGC ACTGATACGG 
GCCGAAGACG GGGAGGCGTG GACCTACACG GACCTCGACC GGCTCGTCTC CGAGACCGCC
GACCGGCTCG TCGCGCACGG CATCGAGGCG GACGACAGGC TCGGCGTGCT CACGCCGCCG
TACGTCGGCA CCGTCGGGCT CGTCCACGCC GCGATGCGGA TCGGGGCAAC ATTCGTTCCG
CTAGGGCAGG AGCTCACCGA GCGGGAGCTC ACCGAACGCG TCGAACGGGC CGACCTCGAC
GCGGTGGTGT GCGCGGAGCC GACGGAAGGG GCCGCGCTCG GCGCGGTCGA GGAGTGTGAG
GGGGGCGACG AGATCCCGGT TCTCTCCGTC GACGATCCGG CCGCCGAGGC CGTCACAGCG
GTACACAGCG TCGATCCCGG CCCGGTCGAG CCGCCGGAGT GGGCGACCAC TGATTACCTC
TGTATCCTGT TCACCTCCGG GACGACGGGC GATCCAAAAC CGGTACCGCT CACCGCGGGC
AACGTGTACA GCTCGGCCGT CGCCTCCGCG TTCCGACTCG GCGTCGACCA CGAGGACCGG
TGGCTCGTGT CGCTGTCGCT CCATCACATG GGCGGGCTCG CCCCGGTGTA TCGGTCCGCG
CTGTACGGGA CGACCCTGGT ACTTCAAGAG GGGTTCAGCC CGGGCGGCAC CGCCGACGAC
ATCGACACCT ACGACGTGAC CGGAATCTCG CTGGTTCCGA CGATGCTACA ACAGATGCTC
GATCGGCGAG GAACCCTCTC GGACACGCTC CGGGTGGCGT TGCTGGGTGG AGCGCCCGCA
CCGGACGAGC TGATCGAGCG CTGTCGCGAC TACTCGATCC CGGTGTACCC GACCTACGGG
ATGACCGAGT CGGCCTCACA GATCACGACC GCGACGCCCC GACAGACGAA AGGACGGCTC
GGCACCGTCG GTCGACCCAT CTTCGGCACC GACGTGACGG TCGTCGACGA GAACGGGACA
CCGGTCGAAC CCGGAGAGAC CGGCGAGATC GTCGTCGACG GCCCGACGAT AACGCCCGGA
TACATCGACG GGGCGGGAGC GCAACGGGGG TCCGACAACA CACGCACCGG GGGTGGCAAA
AACGGCGCAG ATGGATCGAA CACCGCCGCG CTCGATCGAT CGTCGTTCGG CTCGCACGGC
CTTCACACCG GTGACGTGGG GTGCTTCGAC GACGAGGGGT ACCTTTACGT ACTCAACCGC
CTCGACGACC GGATCATCAC CGGCGGAGAG AACGTCGAAC CCGGTGAGGT GATCGACGTG
CTCCGAGAGT TCCCGTCGGC CGAGGACGCC GCCGTGGTCG GGCTCGACGA CGACGTGTGG
GGCGAGCGCG TCTCCGCGCT GCTCGCGGTC GGCGACCGGC TGCGAGATAC CGAGGTGACC
GCGGAAGGAC CGACTGGAGT CGACGGACTA GATGAGTCTG ACGAGCCTGA CGGAGGAGAC
GACGACGACA GGGAGCCAAC TGATCCGGAC GGAGGAGACG AGAGCCGACC GGACGAGAAC
GGATCGGACA AGGAGGGACC GGACGAGAGC GACGCGGCGC CGCTCGTGGA CGACGAGCAG
CTCGTCTCGT TCGTCCGGGA CCGGCTCGCG GGGTTCAAGA TCCCGAAGAC CGTCGCGTAC
GTCGACGAAC TCCCCCGAAC CGTGTCGGGA ACCGTCGATC GGGAAGCGGT GCGCCGAATC
CTCCGCGATC GCGGATACGA TCCGCGGAGG GACGCCGATC TGGAGACGGC GGGATTCGAG
CCGGCCGAAC CGACCGAACC GGCCGGCCCA GACGACCCAG ACGATCCGGC GACAGCGCCG
GCGACATCGA ACGATCGGGA GGAAACAGGG GACGGTGAAC GCGTCGACGA CGGTGGTACC
GACGACGACG ATGAAACCGA CGACCAAAGC GTCGGTGATG ATAGTCGCGA TGGCGAGGGG
AGCGGTGACG ATGGTAGCGG CGACGACGGT GGCGATGGCG ACGAAGACGC GGCCGAACGC
AGCGAAGCGA TAGACGACCG TGTCGGCGGA TAA
 
Protein sequence
MRDWLSHRVV SSPDDTALIR AEDGEAWTYT DLDRLVSETA DRLVAHGIEA DDRLGVLTPP 
YVGTVGLVHA AMRIGATFVP LGQELTEREL TERVERADLD AVVCAEPTEG AALGAVEECE
GGDEIPVLSV DDPAAEAVTA VHSVDPGPVE PPEWATTDYL CILFTSGTTG DPKPVPLTAG
NVYSSAVASA FRLGVDHEDR WLVSLSLHHM GGLAPVYRSA LYGTTLVLQE GFSPGGTADD
IDTYDVTGIS LVPTMLQQML DRRGTLSDTL RVALLGGAPA PDELIERCRD YSIPVYPTYG
MTESASQITT ATPRQTKGRL GTVGRPIFGT DVTVVDENGT PVEPGETGEI VVDGPTITPG
YIDGAGAQRG SDNTRTGGGK NGADGSNTAA LDRSSFGSHG LHTGDVGCFD DEGYLYVLNR
LDDRIITGGE NVEPGEVIDV LREFPSAEDA AVVGLDDDVW GERVSALLAV GDRLRDTEVT
AEGPTGVDGL DESDEPDGGD DDDREPTDPD GGDESRPDEN GSDKEGPDES DAAPLVDDEQ
LVSFVRDRLA GFKIPKTVAY VDELPRTVSG TVDREAVRRI LRDRGYDPRR DADLETAGFE
PAEPTEPAGP DDPDDPATAP ATSNDREETG DGERVDDGGT DDDDETDDQS VGDDSRDGEG
SGDDGSGDDG GDGDEDAAER SEAIDDRVGG