Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1409 |
Symbol | |
ID | 7400728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1420675 |
End bp | 1421031 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708470 |
Product | UspA domain protein |
Protein accession | YP_002566067 |
Protein GI | 222479830 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.379594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCAGG CGGAGGCCTT CGACGCGCGG GTCCACGTCC TCTACGTCGT GAACACGACG TACGCCGGCG TCGGCGCCGG CGGCAGCAAG AACGTCAACT CCCTCCGCGC CGAGGGCGAG GAGGTGATCG AGGAGTTCGA ACAACTGCTC CGCGACGAGG ACGTTGATGT GGTCACGCGG ATCGAAGAGG GAGACCCCCA CACGAAGATC ACGAAATACG CCGACGAGGA GACCGACATG ATCGTCATGG GGACGCGAGG GCGCAGCGGG ATCGAGAAGT ACCTGCTCGG CAGCGTCACC GAGAAGGTCG TGCGGACCGC CGACGTGCCC GTGTTCACGG TGCGGACGCC GGAGTAG
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Protein sequence | MSQAEAFDAR VHVLYVVNTT YAGVGAGGSK NVNSLRAEGE EVIEEFEQLL RDEDVDVVTR IEEGDPHTKI TKYADEETDM IVMGTRGRSG IEKYLLGSVT EKVVRTADVP VFTVRTPE
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