Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1320 |
Symbol | |
ID | 7399415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1332793 |
End bp | 1333281 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708384 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_002565982 |
Protein GI | 222479745 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0636599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCG AGCGCGAGGT ACTCGACGTG TTGGCGCGGA ACGCCCGCGA AGACATCGAC GACATCGCGG CCCAGACGGG CTTCGACGCG GCAGCGGTAG CGGAAGCGAT CGACGCGCTG GAGGCGGATA ACGTGGTTCA CGGCTACCAA GCGGTCGTCG ACTGGGACCG CGTCGACGAG GGGAAGATCC GGGCGCTCGT CGAGATCAAC GTCGAACTCG ACCGCGAGAC CGGCTACGAG CAGGTCGCCG ACCGGATCGC GAAGTTCCCC GCGGTCGACG CCCTCCACCT CGTTTCCGGT GATTACGACT TCGCCGTCGA GGTGCTCGGC GAGACGATGC AGGACGTCTC GCGGTTCATC TCCGAGCAGG TCGCGCCCAT GCCGGAGGTC ACCCAGACGG TGACCCACTA CATCATGGAG ACCTACAAGG ACGGCGGGAT ACGGTTCGAG GACGGCGACG ACGACGACCG CCTCTCCGTC TCGCCATGA
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Protein sequence | MDAEREVLDV LARNAREDID DIAAQTGFDA AAVAEAIDAL EADNVVHGYQ AVVDWDRVDE GKIRALVEIN VELDRETGYE QVADRIAKFP AVDALHLVSG DYDFAVEVLG ETMQDVSRFI SEQVAPMPEV TQTVTHYIME TYKDGGIRFE DGDDDDRLSV SP
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