Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1291 |
Symbol | |
ID | 7399386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1300535 |
End bp | 1301191 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708355 |
Product | GrpE protein |
Protein accession | YP_002565953 |
Protein GI | 222479716 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG ACGACGCCGT CGACGTCGAG GTCGAATCCC CCGACGCCGC CGCCGACGCG GCGAGGACGA ACGGCACCGC GGACGCGGCT GCCGAGGAAG CGAGCAGTGA CGCCCGCGCC GACGGTGAGG CGCTGGCCGC CGCCGTCGCC GAGCACGACG AGGCCCTTGC TCGGGAGGTC GCGGCGCTGG AAGCCGATTT CGCCGAGACG CGCGACGAAC TGCTCGCGGC CGAGGAAGAG GTCGAGGAGC TGACGAGCAA GCTCGCCCGC GTGAAGGCGG ACTTCAGCAA CTACAAGCAG CGCGCCAAGC GGAAGCAGGA CGAGATCCGC GAGCGCGCCT CGGAGGCGCT CGTCGAGCGC ATCACACCGG TCCGCAACGA CCTCCTCCGC GCGCTCGATC AGGAGGAGGG AAGCGATCTC CGCCCCGGCG TCGAATCGAC GCTGGAGAAG TTCGACGAGG TGCTCGCCGA CGAGGGCGTC GAGGCCATCG ATCCCGAACC CGGCGAGGAA GTCGATCCCG CCCGCCATCA GGTAATGTTG CGGGTCGAAA GCGACCAGCC CTCGGGGACT GTTCACGAGG TGTACGAGCC CGGCTACGAG ATGGGCGATC GCGTGGTCAG CGAGGCGAAG GTCACCGTCA GCGCCGACGA GGAGTAG
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Protein sequence | MSDDDAVDVE VESPDAAADA ARTNGTADAA AEEASSDARA DGEALAAAVA EHDEALAREV AALEADFAET RDELLAAEEE VEELTSKLAR VKADFSNYKQ RAKRKQDEIR ERASEALVER ITPVRNDLLR ALDQEEGSDL RPGVESTLEK FDEVLADEGV EAIDPEPGEE VDPARHQVML RVESDQPSGT VHEVYEPGYE MGDRVVSEAK VTVSADEE
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