Gene Hlac_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1291 
Symbol 
ID7399386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1300535 
End bp1301191 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID643708355 
ProductGrpE protein 
Protein accessionYP_002565953 
Protein GI222479716 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACGACGCCGT CGACGTCGAG GTCGAATCCC CCGACGCCGC CGCCGACGCG 
GCGAGGACGA ACGGCACCGC GGACGCGGCT GCCGAGGAAG CGAGCAGTGA CGCCCGCGCC
GACGGTGAGG CGCTGGCCGC CGCCGTCGCC GAGCACGACG AGGCCCTTGC TCGGGAGGTC
GCGGCGCTGG AAGCCGATTT CGCCGAGACG CGCGACGAAC TGCTCGCGGC CGAGGAAGAG
GTCGAGGAGC TGACGAGCAA GCTCGCCCGC GTGAAGGCGG ACTTCAGCAA CTACAAGCAG
CGCGCCAAGC GGAAGCAGGA CGAGATCCGC GAGCGCGCCT CGGAGGCGCT CGTCGAGCGC
ATCACACCGG TCCGCAACGA CCTCCTCCGC GCGCTCGATC AGGAGGAGGG AAGCGATCTC
CGCCCCGGCG TCGAATCGAC GCTGGAGAAG TTCGACGAGG TGCTCGCCGA CGAGGGCGTC
GAGGCCATCG ATCCCGAACC CGGCGAGGAA GTCGATCCCG CCCGCCATCA GGTAATGTTG
CGGGTCGAAA GCGACCAGCC CTCGGGGACT GTTCACGAGG TGTACGAGCC CGGCTACGAG
ATGGGCGATC GCGTGGTCAG CGAGGCGAAG GTCACCGTCA GCGCCGACGA GGAGTAG
 
Protein sequence
MSDDDAVDVE VESPDAAADA ARTNGTADAA AEEASSDARA DGEALAAAVA EHDEALAREV 
AALEADFAET RDELLAAEEE VEELTSKLAR VKADFSNYKQ RAKRKQDEIR ERASEALVER
ITPVRNDLLR ALDQEEGSDL RPGVESTLEK FDEVLADEGV EAIDPEPGEE VDPARHQVML
RVESDQPSGT VHEVYEPGYE MGDRVVSEAK VTVSADEE