Gene Hlac_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1179 
Symbol 
ID7400988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1184864 
End bp1185313 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID643708244 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002565843 
Protein GI222479606 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000178537 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTCG ACGAGACGGA TCGCGCGATC CTCCGAATCT TACAGGAGGA CGCCCGGACG 
CCGTTCTCGG AGGTCGCACG CCGCATCGAC ATGTCGAGTG CGACCGTTCA TGACCGGGTG
AATCGCATGG AGGAGGCGGG AGTCATCGAG GGATACCACG CTGCGGTCGA CCCGAAGGCG
GTCGGCTACG GCGTCAGCGC CTTCGTCGGC CTCCGGGTCG AACAGGGGCG CGAGGAGGAC
GCACTCGAAC GGCTCCGCGA GATCGGCGGC GTTCGCGAGA TCCACCTGAC CACCGGGGAG
TGGGACGTGA TGCTCAAAGT CGTCGCTACG GACACGGACA GCCTCCGCGA GCTGATGTTC
GAGAGCGTTG GGGAGATGGA CGGATTCTCC CGGTCGCAGA CGATGATCAT CCTCGGGACG
GACTACGAGG CGAACGGGCC ACCGGTCTGA
 
Protein sequence
MELDETDRAI LRILQEDART PFSEVARRID MSSATVHDRV NRMEEAGVIE GYHAAVDPKA 
VGYGVSAFVG LRVEQGREED ALERLREIGG VREIHLTTGE WDVMLKVVAT DTDSLRELMF
ESVGEMDGFS RSQTMIILGT DYEANGPPV