| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1173 |
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| Symbol | |
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| ID | 7400982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1180009 |
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| End bp | 1180419 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643708238 |
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| Product | halocyanin domain protein |
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| Protein accession | YP_002565837 |
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| Protein GI | 222479600 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3794] Plastocyanin |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03102] halocyanin domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00281151 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCGACC GAACGCGTCG AGAGGCGCTC GCTGGAGCGG GAGCCGTCGC CGTCGCGGCG
CTCGCGGGCT GTGCCGACGC CGTCATCCCG GGTGGCGACG AGGGGAGCGA TCCGGAACCG
GTCGACCGGA CGGACGAGGA GCAGGTGACT GTCGCCGTCG GCGCCGACGC CGGGTTCGCC
TTCGCGCCCG CGAACCTCAT CGTCGACACC GGGACGACAG TCGTCTGGGA GTGGACGGGC
GCCGGCGGCG CACACAACGT GGTCGACAGG GGCGGGGCCT TCGAGTCCGA ACTCACCGGC
GAGGAGGGGT ACACCTTCGA GTACACGTTC ACGGATTCCG GCGTCGTTGA ATACGTCTGT
ACGCCGCACC AGACGCGCGG GATGGAGGGG ACCATCGAAG TCGTGGAGTG A
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| Protein sequence | MTDRTRREAL AGAGAVAVAA LAGCADAVIP GGDEGSDPEP VDRTDEEQVT VAVGADAGFA
FAPANLIVDT GTTVVWEWTG AGGAHNVVDR GGAFESELTG EEGYTFEYTF TDSGVVEYVC
TPHQTRGMEG TIEVVE
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