Gene Hlac_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1005 
Symbol 
ID7401900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1002035 
End bp1002436 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content73% 
IMG OID643708071 
Productprotein of unknown function DUF35 
Protein accessionYP_002565672 
Protein GI222479435 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.966695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTC CCGCGAGCAA CGGGGCCTAC GACGAGTGGC TCGACGCCCT CGCGGAGGGC 
GAGGGCTACG CCCTCGTGTG TCCGGACGGA CACGGGTCGC TCCCCCCGCG ACGGGTGTGC
CCGGAATGCG GGTCCGCGAC GCTCTCCGAG GAAGCCCTCG CCGAGACCGG AACCGTCGAG
ACGTACAGCG TCGTCCACGT CGCCGGCCCG CAGTTCGCCG ACGACACCCC GTACGTGAAC
GCCATCGCCG ACTTCGGACC GGTCCGGCTC ACGGGGGTTC TGCGGGGGAT TGATCCCGCG
ACCGACGCCG TCGAGATCGG TGACCGGGTC GCGCCCGGCG TCGAGGAGCG CGTGACCGAC
GGGGAGCCGC TCGTCGTCTT CCGTCCGGCG GACGGGGAGT AG
 
Protein sequence
MSAPASNGAY DEWLDALAEG EGYALVCPDG HGSLPPRRVC PECGSATLSE EALAETGTVE 
TYSVVHVAGP QFADDTPYVN AIADFGPVRL TGVLRGIDPA TDAVEIGDRV APGVEERVTD
GEPLVVFRPA DGE