Gene Hlac_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0970 
Symbol 
ID7401864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp961061 
End bp961387 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content62% 
IMG OID643708036 
ProductTranscription factor TFIIS 
Protein accessionYP_002565638 
Protein GI222479401 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID[TIGR01384] transcription factor S, archaeal 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCT GCGACGAGTG CGGATCGATG ATGAAGTCCG GCGAGGGCGA GGACCACTGG 
GTGTGTAGCT CTGAGGATTG TGGTAACGAG CTCGGCCGCG ACAACGGCGA CGACGAGTGG
ACCACCGAAT CGCAGGTCGA GTCGGAGGTC ATCGACGTGA GCGACGCGGA GGACAAAGGA
CTCCCGAAGA CGACAGCCCA CTGCCCGGAG TGCGGGAACG ACCGCGCGTA CTGGTACATG
CAGCAGATCC GGTCGGCCGA CGAGTCCGAG ACCCGATTCT TCGTCTGTAC CGAATGCGAG
CACAAGTGGC GCGAAGACGA CCACTGA
 
Protein sequence
MKFCDECGSM MKSGEGEDHW VCSSEDCGNE LGRDNGDDEW TTESQVESEV IDVSDAEDKG 
LPKTTAHCPE CGNDRAYWYM QQIRSADESE TRFFVCTECE HKWREDDH