Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0970 |
Symbol | |
ID | 7401864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 961061 |
End bp | 961387 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643708036 |
Product | Transcription factor TFIIS |
Protein accession | YP_002565638 |
Protein GI | 222479401 |
COG category | [K] Transcription |
COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
TIGRFAM ID | [TIGR01384] transcription factor S, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCT GCGACGAGTG CGGATCGATG ATGAAGTCCG GCGAGGGCGA GGACCACTGG GTGTGTAGCT CTGAGGATTG TGGTAACGAG CTCGGCCGCG ACAACGGCGA CGACGAGTGG ACCACCGAAT CGCAGGTCGA GTCGGAGGTC ATCGACGTGA GCGACGCGGA GGACAAAGGA CTCCCGAAGA CGACAGCCCA CTGCCCGGAG TGCGGGAACG ACCGCGCGTA CTGGTACATG CAGCAGATCC GGTCGGCCGA CGAGTCCGAG ACCCGATTCT TCGTCTGTAC CGAATGCGAG CACAAGTGGC GCGAAGACGA CCACTGA
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Protein sequence | MKFCDECGSM MKSGEGEDHW VCSSEDCGNE LGRDNGDDEW TTESQVESEV IDVSDAEDKG LPKTTAHCPE CGNDRAYWYM QQIRSADESE TRFFVCTECE HKWREDDH
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